| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_1081 |
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| Symbol | |
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| ID | 8424581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013205 |
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| Strand | + |
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| Start bp | 1145813 |
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| End bp | 1146343 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645027199 |
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| Product | RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily |
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| Protein accession | YP_003184507 |
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| Protein GI | 258511073 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000001651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGCGG CGCAAGAGGT GCTGGTTGTC GAAAACCAGA GACTGGTGTA TTTCGTGGCG
AACCGCTTTC GCCATCGTGC TGTAGCGGCG GGAATCGAGT TCGACGACCT TGTTGCGACG
GGAATGTTGG GACTATGCAA GGCGGCGAGG GTATATGACC CGTCGCGAGC AAAGTTCTCT
GTCCTTGCGG TTCGGTGCAT CGAGAACGAG ATGCGTTTAC TCCTGCGTCA GGCTCGCCGC
CGACCGAAGA CCACATCGTT GGACGATGTG CCGCGTGAAG ACGACGAATC GAAAGCTGGG
CATCCGGAGA GTGTTTGGTT GCGTTACGAA GCGGATTTTA GCGAGGTGGA GTGGCGGGAG
TTCGCCGGCC GCTTGTCGGC TCGGGAACGA AGCGTATTGG CGCTTGCGTG GTTGGGATAC
ACGCAAAAGG ACATCGCGAA GCGCGTGGGG ATCTCCCTGA CGCACGTAAG CCGAGTTTTG
GCGCGTGTCG AACGACGCTG GAATCATCAA TCACAAGCGA AAGGCGGATA A
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| Protein sequence | MNAAQEVLVV ENQRLVYFVA NRFRHRAVAA GIEFDDLVAT GMLGLCKAAR VYDPSRAKFS
VLAVRCIENE MRLLLRQARR RPKTTSLDDV PREDDESKAG HPESVWLRYE ADFSEVEWRE
FAGRLSARER SVLALAWLGY TQKDIAKRVG ISLTHVSRVL ARVERRWNHQ SQAKGG
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