Gene Aaci_1043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1043 
Symbol 
ID8424535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp1111256 
End bp1111849 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content64% 
IMG OID645027154 
ProductSNARE associated Golgi protein 
Protein accessionYP_003184470 
Protein GI258511036 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGCATC TGACCACGCT TGTGATTCAT CACGGTCTTC TCGGCATCTT CCTGTTGATG 
GCCCTCGAGA GCTGCTGCAT TCCCATTCCC TCCGAGGTCG TGATGCCGCT CGCCGGCTTC
CTCGCCTATC GGCACCTTCT TGGCTTTTGG CCCGCCGTCG CGGTGGCCAC GGTGGCCAAT
GTCGTGGGAA GCCTCGTCGC GTACGCCATC GGCAACTACG CCGGCCGCGC CTTCGTGCTT
CGCTACGGCC GATACGTGGG TCTCACGCCC CGCCACCTGG AACGCGCAGA ACGCTGGTTC
CATCGATTCG GCGAAGCGAC GGTCTTCTTT GGGCGCATGG TGCCCGCCGT GCGCACGTTC
GTATCCCTGC CCGCGGGCTT CGCGCGGATG TCCGTCGCGC AATTTGTCCT CTTCAGCCTG
CTCGGGTCGT TCGTGTGGAA CCTCGCGCTC GTGTACGGCG GTTACCAGCT GAACAAACAA
TGGCAGCTCC TGGCCGATCA CGTCAAACCC TTCACGTACC TCGGCGCCGC GATCCTCGTG
GCCGCCCTGC TCTGGTTCTG GTTGCGCCGG CGCGCGGGTC AGAACGCCGA ATAG
 
Protein sequence
MSHLTTLVIH HGLLGIFLLM ALESCCIPIP SEVVMPLAGF LAYRHLLGFW PAVAVATVAN 
VVGSLVAYAI GNYAGRAFVL RYGRYVGLTP RHLERAERWF HRFGEATVFF GRMVPAVRTF
VSLPAGFARM SVAQFVLFSL LGSFVWNLAL VYGGYQLNKQ WQLLADHVKP FTYLGAAILV
AALLWFWLRR RAGQNAE