Gene Aaci_0938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0938 
Symbol 
ID8424431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp1014832 
End bp1016022 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content66% 
IMG OID645027051 
ProductGTP cyclohydrolase II 
Protein accessionYP_003184367 
Protein GI258510933 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II
[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACCA TCGAAGAGGC GCTTGAAGAT TTGCGCCAGG GCCGCGTCGT GATCGTCGTG 
GACGATGAGG ACCGCGAGAA CGAGGGGGAT TTCGTCGCGC TCGGCAGCCG CGCCACGCCG 
GACGTGGTGA ATTTCATGAT CACGCACGGC CGGGGGCTTT TGTGCGTACC CATCACCGAA 
GCGCGCGCCA AGCGGCTCGG CCTCGAGGCG ATGTACGAGC GCAACACGGA CAACTACGGC 
ACCGCCTTCA CGGTGTCGGT CGATCTCGCC ACCACGCACA CCGGCATCTC GGCGTTCGAG 
CGGGCCGAGA CCATCGCGGC CATCGTGTCG GAGGAGACGG GCCCGGACGA TTTCCGCAAG 
CCGGGCCACG TGTTTCCGCT CGTGGCTAAG CCCGGCGGCG TGCTCCGCCG TGCGGGCCAC 
ACCGAGGCGG CGGTCGATCT CGCCCGCCTC TGCGGGGAGC CTGAGGTCGG CGTCATCTGC 
GAGATTCTGA ACGAGGACGG CACCATGGCG CGCCTGCCGC AGCTCGAGCA GGTGGCGGAT 
CGATTCGGCC TGAAGCTCAT CACCATCGCG GATCTCATTG CGTACCGCAA GCGAACCGAA 
AAGCTCGTGC GCCGGGCGGC CGAGGCCGAG CTGCCCACGG CGTATGGACA CTTTCGGGCC 
GTGGTCTATG AGAGCGAGAT TGACGACAAG GAGCACATCG CGCTCGTCAT GGGCGATGTC 
TCCGACGGCG AGCCGACGCT CGTGCGCGTG CACTCCGAGT GCCTCACGGG CGACGCGTTC 
GGATCGTTGC GCTGCGACTG CGGGCCTCAG CTTCACGCCG CGCTGCGCCA GATTGCGCGC 
GAAGGAAAGG GCGTCTTGTT GTATCTGCGC CAGGAAGGGC GCGGCATTGG CCTCTTGAAC 
AAGATTCGGG CGTATGCGCT GCAGGATCAG GGCCTGGACA CGGTGGAGGC CAACCACCGG 
CTCGGCTTCG CCGACGATCT GCGCGACTAC GGCATCGGGG CGCAGATTTT GCGCGATCTC 
GGCATCCGCA AGATGCGCCT TTTGACGAAC AACGTGCGCA AGATCAAGGG CATCGCGGGG 
CACGGTCTCG AAGTCGTGGA GCGCGTGCCG CTCGAGGTGG ATCGGAATCC GTACAACGAG 
GCGTATCTGC GCACGAAGCG GGACAAGCTG GGGCATCTGC TGAACCTGTG A
 
Protein sequence
MNTIEEALED LRQGRVVIVV DDEDRENEGD FVALGSRATP DVVNFMITHG RGLLCVPITE 
ARAKRLGLEA MYERNTDNYG TAFTVSVDLA TTHTGISAFE RAETIAAIVS EETGPDDFRK 
PGHVFPLVAK PGGVLRRAGH TEAAVDLARL CGEPEVGVIC EILNEDGTMA RLPQLEQVAD 
RFGLKLITIA DLIAYRKRTE KLVRRAAEAE LPTAYGHFRA VVYESEIDDK EHIALVMGDV 
SDGEPTLVRV HSECLTGDAF GSLRCDCGPQ LHAALRQIAR EGKGVLLYLR QEGRGIGLLN 
KIRAYALQDQ GLDTVEANHR LGFADDLRDY GIGAQILRDL GIRKMRLLTN NVRKIKGIAG 
HGLEVVERVP LEVDRNPYNE AYLRTKRDKL GHLLNL