| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_0915 |
|---|
| Symbol | |
|---|
| ID | 8424408 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 992229 |
|---|
| End bp | 993071 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 645027028 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003184344 |
|---|
| Protein GI | 258510910 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATGG CCACATCCGC ACCATCCCCG TCCTGGCGCC GCGCCGGCCT GTGGATGTAC
GTGATTGCCG TGATCTACGC GGCCATTTCG CTGGTGCCCT TTCTGTGGTC CATCTACACG
TCGGTCAAGC CGACGTCCGA GGTGTTTCAA CTCTTCGTGC CCTGGCGGAC CCTGACGCTG
TCGAGCTACA CCTCCATCCT GCAGAACTTC CCGTTTGGGC GCTGGTTTTT GAACAGCGCC
ATCGTGGCGT TCATCGTGAC CGTGGGAAAC CTGGTGGTGA ACACGTTTGC GGGCTACGCG
TTTGCGCGGC TTCGTTTCCC GGGCCGGGGC TTTTTGTTTT ACGTCTTCCT CGGCGTCATG
ATGATCCCAG GACAGGTGGT CTTGGTTCCC ATTTACATGC TGCTCGCGCG CCTCGGCTGG
ATCGACACCT ACGTCGGGCT CACCGTGCCG TTCTTGCTGA GTTCCACCAT GGTGTTTTTG
TCGCGCCAGT TTTTCCTCGG CATCCCGAAG GAGCTGGAGG AGGCGGCTCG CATCGACGGC
ATCGGATACT TCGGGATGTT CTTTCGCATC ATGCTGCCGC TCGCGCGTCC GCTCCTGGCC
GCGCAGACCA TTCTGACGTT CCAGGGCAAC TGGAACTCGT TTCTCTGGCC GCTTCTCATC
GGTCAGACGA CGAACATGTA CACGTTGCCG GTGGGGCTGA ACTCGTTTTA TGGCCAGTAC
AACGCGTACT GGAACAGCGT GATGGCGGGC ATGGTCCTGC TGACGGTTCC CATGATGGTT
GTGTTCATCA TCTTTCAGCG CCAATTCATT CAGGGCGTGT CCCAAGCAGG ACTCAAAGGC
TGA
|
|---|
| Protein sequence | MRMATSAPSP SWRRAGLWMY VIAVIYAAIS LVPFLWSIYT SVKPTSEVFQ LFVPWRTLTL
SSYTSILQNF PFGRWFLNSA IVAFIVTVGN LVVNTFAGYA FARLRFPGRG FLFYVFLGVM
MIPGQVVLVP IYMLLARLGW IDTYVGLTVP FLLSSTMVFL SRQFFLGIPK ELEEAARIDG
IGYFGMFFRI MLPLARPLLA AQTILTFQGN WNSFLWPLLI GQTTNMYTLP VGLNSFYGQY
NAYWNSVMAG MVLLTVPMMV VFIIFQRQFI QGVSQAGLKG
|
|---|
| |