Gene Aaci_0801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0801 
Symbol 
ID8424294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp874554 
End bp875777 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content66% 
IMG OID645026917 
Productthreonine dehydratase 
Protein accessionYP_003184233 
Protein GI258510799 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1171] Threonine dehydratase 
TIGRFAM ID[TIGR01127] threonine dehydratase, medium form 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.103174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAGGATC GGTCGCTACC CACCTTGGAG GATATCGAAC GGGCGAGAGA GCGGATTCGA 
GGGAGCGCGC TGTATACGCC GCTCGACTAC TCCGAGACGT TTTCGCGCCT GTCCGACAAC
GAGGTCTATC TCAAACTGGA GAACTTGCAG AAGACGGGAT CGTTCAAGTT GCGCGGCGCG
CTGAACAAGA TCACGGTGCT CGCGGAGTCG GGCACCCTGA CTGGCGTTGT CGCCGCGTCC
GCGGGTAACC ACGCGCAGGG CGTCGCCTAT GCGGCGCGAG GGCGCGGGGT GCCATGCACC
ATCGTCATGC CGGAAGGAGC GAGCCTCGCC AAAATTATGG CCACGCAGCG GTACGGGGCG
CGCGTGGTGC TCCACGGCGA CGATTACGAC GCCGCATACG GGCACGCGAG CGAGATCGCC
ATGCGCGAGG GGCTCACCTA CATTCACGCG TTTGACGATC CCGACATCAT CGCCGGTCAG
GGAACCATTG GGCTCGAGAT TGCGGAGCAG TTGCCGGACG TGAGCGCCGT CATCGTGCCG
ATGGGAGGTG GCGGGCTCGC GGCGGGCATC GCCATCGCGC TCAAATCCCT GCGCCCTGGC
GTGAAAATCT ATGGCGTTCA GGCAAAGGCC GTGCCCGCGT TCCGCCACGC GCTCGATCTC
GGCGCCATCG AGACGGTGCC GGGCGAGCCG ACCATCGCAG ACGGCATCGC GGTGCGGCGG
CCCGGTGTGC TGACGTTCGA GGCTGCGAAG CGGTACATCG ACGACGTGGT CGTCGTGGAG
GAGGACGAGA TCGCCCGCGC GATGATCCTG CTCATGGAGC GGTCGAAGCT CGTGGTGGAG
GGCGCAGCGG CCACCACCAT CGCAGCCGTG CTGGGGAAAA AGGTGCCGGC GGGGCTCGGC
AAGGTCGTGG CCGTGTTGTC CGGCGGCAAC GTCGACGTGG TGGTGCTGTC GCGGATCATC
GAACACGGGC TGGTGGAATC AGGGCGTTAC CTGCGCCTCG CCGTGACGAT TCAGGACCGC
GTGGGCGCGC TGCGGGATCT GCTTGACATC GTCGCCCGGC TCCGCGCGAA CGTGCTCACG
GTGCACCATC AGCGCGTAGG ATCGCACATC CACCTCGGGC AGACGGAGGT CGAGATCGAC
CTCGAGACGC GCGATCACGC CCACATCCGG CTGATCTGCG ACACGCTGCG CCAGGCGGGG
TACGAGCCGG TCATCCGGGA TTGA
 
Protein sequence
MQDRSLPTLE DIERARERIR GSALYTPLDY SETFSRLSDN EVYLKLENLQ KTGSFKLRGA 
LNKITVLAES GTLTGVVAAS AGNHAQGVAY AARGRGVPCT IVMPEGASLA KIMATQRYGA
RVVLHGDDYD AAYGHASEIA MREGLTYIHA FDDPDIIAGQ GTIGLEIAEQ LPDVSAVIVP
MGGGGLAAGI AIALKSLRPG VKIYGVQAKA VPAFRHALDL GAIETVPGEP TIADGIAVRR
PGVLTFEAAK RYIDDVVVVE EDEIARAMIL LMERSKLVVE GAAATTIAAV LGKKVPAGLG
KVVAVLSGGN VDVVVLSRII EHGLVESGRY LRLAVTIQDR VGALRDLLDI VARLRANVLT
VHHQRVGSHI HLGQTEVEID LETRDHAHIR LICDTLRQAG YEPVIRD