| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_0799 |
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| Symbol | prpD |
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| ID | 8424292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013205 |
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| Strand | + |
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| Start bp | 872120 |
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| End bp | 873565 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 645026915 |
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| Product | 2-methylcitrate dehydratase |
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| Protein accession | YP_003184231 |
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| Protein GI | 258510797 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
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| TIGRFAM ID | [TIGR02330] 2-methylcitrate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0023431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTCAA CCGTGGATCG CCAGGGCGGA CGCCCGTTTG ACGACGTGAT CGTGCAGATG
ACGGACTATG TGATGAAGCC AGAGGTCGCG AGCGACGAGG CGCTTCACAT TGCGCGCCAC
GTGCTCATGG ACACCATTGG GGTGGGGTTG CTCGCCCTCT CGTTCCCAGA ATGCGCGAAG
CACATCGGGC CGTACGTGCC TGGGGCCGTG ATGCCGGGGG GCGTGCGGGT GCCGGGCACG
AAGTACGAGC TCGATCCGGT CCAGACCGCG TTCAACATCG GCGTGATGAT CCGCTGGCTC
GACTACAACG ACACGTGGCT GGCGATGGAA TGGGGGCATC CGTCGGACAA CCTGGGCGGC
ATCCTGGCCG TGGCGGATTA CGTGAGCCGC GAGGCGCGCA GGCGGGGACA AAAACCCTTG
ACGGTGCGCC AATTGCTCGA GCGCATGGTG CAGGCGCACG AGATCCAGGG TGTGCTCGCG
CTCGAGAACA GCTTGAACCG CCGCGGGCTC GATCACGTCC TGTTCGTGAA AGTGGCTTCG
ACGGCGGTCA CCACCGCGAT GCTCGGCGGA TCGCGCGAAC AGATTCAGAA CGCCGTCTCC
AACGCGTGGA TCGACAACGC GCCGCTCCGC ACGTATCGCC ACGCACCGAA CACGGGATCC
CGCAAGTCGT GGGCGGCGGG CGACGCGACG AGCCGCGCCG TGTGGCTCGC GTTCATGGCG
CTGCGCGACG AGATGGGCTA CCCGAGCGCG CTCACGGCGC CTCAGTGGGG CTTTAGCGAC
GTGGTCATGG GCGGCAAGCC GATTGTGCTG GCGCGGCCGC TCGGCTCGTA CGTGATGGAG
AACGTGCTCC TGAAGATCTC CTTCCCGGCG GAGTTCCATG CCCAGACGGC GGTGGAGTGC
GCGTTCCAGC TGCATCCGCT CGTGAAGGAT CGCCTCGACG AGATCGAGCG CATCGTCATC
ACGACGCACG AGTCCGCGAT TCGCATCATC GACAAAAAAG GGCCGCTTCA CAATCCGGCG
GATCGGGATC ACTGCATCCA ATACATGGTC GCGGTGGGAC TCATCTACGG CGATCTGCGG
GCCGAGCACT ACGAGGACGA GACGGCAAGC GATCCGCGGA TCGACGCGCT GCGCGAGAAG
ATGGAGGTCG TCGAGGATCC GCGTTACAGC AAAGATTACC TCGATCCGGA CAAGCGCTCC
ATCGCGAACG CCGTTCAGAT CTTCTTCCGC GACGGATCGC ACACCGACAA GGTGGAAGTG
GAGTATCCCA TCGGCCATCG CCGCCGCCGC GCGGAAGGGC TGCCGAAGGT CATTGAAAAG
TTCCGCGCGA ACCTGTTGAC GCGCTTTCCG GAGAAGCGCG CCGAACGCAT CCTCGACCTG
TGCCTGGACG CCGAGCGGCT GCATGAGACG CCGGTCGACG AGTTCATGGA GCTGTTTGTC
ATCTGA
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| Protein sequence | MSSTVDRQGG RPFDDVIVQM TDYVMKPEVA SDEALHIARH VLMDTIGVGL LALSFPECAK
HIGPYVPGAV MPGGVRVPGT KYELDPVQTA FNIGVMIRWL DYNDTWLAME WGHPSDNLGG
ILAVADYVSR EARRRGQKPL TVRQLLERMV QAHEIQGVLA LENSLNRRGL DHVLFVKVAS
TAVTTAMLGG SREQIQNAVS NAWIDNAPLR TYRHAPNTGS RKSWAAGDAT SRAVWLAFMA
LRDEMGYPSA LTAPQWGFSD VVMGGKPIVL ARPLGSYVME NVLLKISFPA EFHAQTAVEC
AFQLHPLVKD RLDEIERIVI TTHESAIRII DKKGPLHNPA DRDHCIQYMV AVGLIYGDLR
AEHYEDETAS DPRIDALREK MEVVEDPRYS KDYLDPDKRS IANAVQIFFR DGSHTDKVEV
EYPIGHRRRR AEGLPKVIEK FRANLLTRFP EKRAERILDL CLDAERLHET PVDEFMELFV
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