| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_0647 |
|---|
| Symbol | |
|---|
| ID | 8424138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | - |
|---|
| Start bp | 695531 |
|---|
| End bp | 696472 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 645026766 |
|---|
| Product | ribonuclease Z |
|---|
| Protein accession | YP_003184084 |
|---|
| Protein GI | 258510650 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
|---|
| TIGRFAM ID | [TIGR02651] ribonuclease Z |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.834913 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCTCA TCTTTCTCGG CACGGGCGCC GGGGCCCCTT CCCGGCGCCG CAACGTGACC
GCCATCGCGC TTCGCCTGAC CCGCGACGAC AGCACCGTGT GGCTGTTCGA CTGCGGCGAA
GCGACCCAGC ACCGCATGTT CGACGCGCCA TTCGGCCCCA ACCGGGTCGA TCGCGTCTTC
ATCACGCACC TCCACGGCGA TCACATCTTC GGCCTTCCTG GCCTCCTCAG CACGCGATCC
TTCCCAGAGA ACGTGGGACC GCTGCGCCTG TACGGCCCAC CCGGTATCCG GGCGTTCGTC
CGGGCCACCC TCGATGGGAG TCAGACGCAC CTCAGCTACG AGATCCAATT TCACGAGTGG
ACGTCCCCCG AACCAGCGCC CGTCCGCGAA GGGCTGTACA CCGTGCGCGC AGCGCTCCTC
GATCACGCCA TTCCTTCTTA CGGCTACCGC GTTGAAGAAG CGCCGTTCCC AGGCCGCCTT
CACGCGGATC GGCTCCGCGC GGAGGGACTT CAGCCGAGCC CCCTCTGGTC GCAGCTCAAG
GCGGGCGAAG ACGTGACCCT TCCTGATGGA CGGCGGCTGC GCGCGGCCGA TTTCGTCGAT
CCAGCCGAAC CCGGGCGCGT CATCGCCATC CTCGGCGACA CGAGGCCGTG CAAGGCCGCG
GTGGAACTGG CGCGCGGCGC CGACTGCCTC GTGCACGAAG CCACGTTCCT GGACCGGCAC
GCGCATCTCG CCTCGGCCTT CTTCCACAGC ACGGCGCGCC AGGCGGCCGA GATCGCGCGG
GAGGCAGAGG CCAAGTGTCT CATCCTCACG CACGTGAGCG CCCGTTACGA GCGGGCGGAG
GAGGACGAGA TCCTCGCGGA GGCCCGAGCC GTTTTTCCCA ACACCCTGCT CGCGCACGAC
GGCATGGTCT ACGAGATCGC GCGGAGAAAG CGGGACGTGT GA
|
|---|
| Protein sequence | MELIFLGTGA GAPSRRRNVT AIALRLTRDD STVWLFDCGE ATQHRMFDAP FGPNRVDRVF
ITHLHGDHIF GLPGLLSTRS FPENVGPLRL YGPPGIRAFV RATLDGSQTH LSYEIQFHEW
TSPEPAPVRE GLYTVRAALL DHAIPSYGYR VEEAPFPGRL HADRLRAEGL QPSPLWSQLK
AGEDVTLPDG RRLRAADFVD PAEPGRVIAI LGDTRPCKAA VELARGADCL VHEATFLDRH
AHLASAFFHS TARQAAEIAR EAEAKCLILT HVSARYERAE EDEILAEARA VFPNTLLAHD
GMVYEIARRK RDV
|
|---|
| |