Gene Aaci_0414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0414 
Symbol 
ID8423904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp481672 
End bp483435 
Gene Length1764 bp 
Protein Length587 aa 
Translation table11 
GC content63% 
IMG OID645026543 
ProductTetratricopeptide TPR_2 repeat protein 
Protein accessionYP_003183862 
Protein GI258510428 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAAATGG ACAAACGTCG CCATCGCTAC AACAAGGTGG ATCGACCCGA GAACGTCATT 
GCGATGAAGC TGGACGCGTC CTACTTCTTC GAGCGAGGCA TGCGCTTCTT GCAGCGGAAT
GATCTGGCGC GCGCGGTGAA AGCGTTCCAG AGGACCGTGG AGTATGAGCC CGACAATCCG
GTCAATTACT GCAATCTCGC GGGCGTGCTC GCGGAGCTCG GCGATTTTGA AGCTTCCAAT
GAACTGTTGC ACTACGTGCT TGAACATATG GATCCGCACA TGTCGGAATG CTGGTTTTAC
CTCGCCAACA ATTACGCGAA CCTGGGGGAC TACGACGCGG CTGAAGAACA CCTCCTTCGA
TACCTGGATC TCGATCCAGA CGGAGAATAC GCCGCCGAGG CGGAAGAGAT GCTCTCCATT
CTCATCGACG AGTTTGGCGG CGGCCGGGCG CTGGAGCGGC GGAGGCGCGA GGAAGCCCGC
GCGGAAACGA TGCAGGCCAT CCAGGACGGG CGCTACTTTC TCGAAAACGG GCAGTTTGAG
GTCGCCGTGG AGTGGCTGGA GCAGGTGGTG GCGGCCGATC CGTCTCACAT CGCGGCGCGC
AACAACCTCA GCTTGGCGTA CTATTACACG GGCCAGTACG ACAAGGCGCT TGCGATGGCG
GAGAGCGTTC TTGAACGCCA GCCCGACAAC CTGCATGCGC TCTGCAACCG CGCGCTTTTG
TTGCAACATT TCGGCGACGA GGATCGGTTG CGGCGAGCGG TGGAGCCGCT CCAGAAGGTC
ATCCCGCTTC ACCCGGACAT CGCGATGAAG GTGGCCATTA CGCTGGGGTT TGTCGGCCGC
CACGCCGACG CGCTCGCCGC GTTTCGCCGC CTCGCACGCC TCGTCCCACC AGATCACCCC
ATGTTGCTGC ACGGTCTCGC CGCCGCGCAT GCGAACCTCG GCAACCTGAC CTGCGCGGAA
GCGCTTTGGA GGCAATTGTC TCGACACGAG GACTGCGCGC GCGTCGCGGA CTATCACCTC
GAGCGGGTGC GCCAAGCGCG GGGAGCGGGG CTCACCTCGG TGAGCGTCAG TTATCAGCTG
GACATCCCGG TCGAGATGCA GCTCGCCGAA GTCCGAGATC GCCTACAGAC GTCGTCTCCA
GACGAATGGA AGCGAGATCC GCTCCTGCGC GCGTCGCTCT ACTGGAGTTT GCGACATGGC
AACCGCGAGG TGCGCCAGCG TGTCATTCGC GCGCTCGCGG TCGTCGGCGA CGGCGACGCA
GAGCAAGCGC TGAAGTCGTT TTTGGCTCGG CCCGACATCG ACGCGTCGCT TCAGGAGCAG
ACCCTCGTGG CGCTCAAGCG GATGGGCGCG AAAGGCTCAG TTCGAATCTG GCGCGCCGCG
GGTCCCATCG AGATGCGGCT GGAGGACGTG CGGCAGGACA TCATCCTGGA TCTGCAACCG
CAGTGGCGAG AAGTTTGGGA CCTTGCGGAG GAATGGCTCA TCGCCCGCGG TCTTCGTGCC
CTGGTGGGTC AGGCGCGTCG GTTCTGGCTC ACGTACTTGT ACGACGACCT GTTCCTCGAT
CTGCGCAAGC GGATTGTGAA ACCGGAAAGC TGGGCGGCCG GCCTCCTGTA TGTGGTGCTT
CGCTACGCCA ACGTACCCGT TTTGCAGCGC GATCTCGCCG CTCATTTCAG CGTTTCCGTG
TCCTCGCTCA GCAAATGCAG TTCCCGCATG GAGCAGGTGG TGCTTCGGGC GGGATGGCGG
GCGCGGCGGA GCCGCGAAGA GTGA
 
Protein sequence
MQMDKRRHRY NKVDRPENVI AMKLDASYFF ERGMRFLQRN DLARAVKAFQ RTVEYEPDNP 
VNYCNLAGVL AELGDFEASN ELLHYVLEHM DPHMSECWFY LANNYANLGD YDAAEEHLLR
YLDLDPDGEY AAEAEEMLSI LIDEFGGGRA LERRRREEAR AETMQAIQDG RYFLENGQFE
VAVEWLEQVV AADPSHIAAR NNLSLAYYYT GQYDKALAMA ESVLERQPDN LHALCNRALL
LQHFGDEDRL RRAVEPLQKV IPLHPDIAMK VAITLGFVGR HADALAAFRR LARLVPPDHP
MLLHGLAAAH ANLGNLTCAE ALWRQLSRHE DCARVADYHL ERVRQARGAG LTSVSVSYQL
DIPVEMQLAE VRDRLQTSSP DEWKRDPLLR ASLYWSLRHG NREVRQRVIR ALAVVGDGDA
EQALKSFLAR PDIDASLQEQ TLVALKRMGA KGSVRIWRAA GPIEMRLEDV RQDIILDLQP
QWREVWDLAE EWLIARGLRA LVGQARRFWL TYLYDDLFLD LRKRIVKPES WAAGLLYVVL
RYANVPVLQR DLAAHFSVSV SSLSKCSSRM EQVVLRAGWR ARRSREE