Gene Aaci_0357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0357 
Symbol 
ID8423844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp414938 
End bp416140 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content70% 
IMG OID645026483 
Productalanine racemase 
Protein accessionYP_003183805 
Protein GI258510371 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0787] Alanine racemase 
TIGRFAM ID[TIGR00492] alanine racemase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACCGGC CCCTGTTTGC CGTGATCGAT CTCGCCCATC TTTCCCACAA CATCCGGTAT 
CTGAAAAGCA GGTTGCGCCC GGGCGCGAGC CTCATGGTGG CGGTCAAGGC GGATGCCTAC
GGACACGGCG TGCGCGCGGT GGTGGGCCGG CTTGTGCGCG AGGGGGTGCA CCACGTGGCC
GTGGCTTCGC TCGAGGAGGC GCTCGAGATC CGCGCGTTCC ATCGCGGCGT GAACATCCTG
GTCCTGGGCG CGGTGACGCC GGACGCTTGC ATGAAGGCCG CGGAGGCCGA GGTCGAGATC
GCCCTGACCG ACCTGAGCCC CATCGACGAG ATTCCGCGAC TGCCGAAGCG GCTTCGAGTC
CACCTGCCGC TCGACACAGG CATGAACCGG CTCGGGGTCA AGCGAACGGA CGAAGCCGTG
GCGCTCGCGC GGGCCATCGC AAAGCGAGAG GATCTGGAAT TGGTGGGTGC GGGCACGCAC
CTGGCCGCCG CTGATGCGGA AGATCCCGCG CACGCGGCGG GGCAGATGGA GCGCCTCGGG
GCGTTTGTGC GCGCGCTCGA GCAGGCGGGA CTTCGCCCAC CGCGCATCCA CGCCGGGAAC
AGCGCGGCGC TCCTGCGCAA TCCCGCCTGG CACCTCGACA TGGTGCGCGT CGGGATCGCC
GCGTACGGCT ATTCGCCCGA TCCGTCGGTC CTCCCGGCGC CCTCGCTGCG CCCGGTGATG
AGCCTTTACG CGGGCGTGCT GCGCGTCGCG CAGGCACAGC CTGGGGAAAC CGTGGGGTAC
GGCGCGACCT TCACGGTGAC GCGGCCCATG ACCATCGCCA CCGTTGCGGG CGGGTACGCG
GACGGCTATC CGCGGCACCT GTCGAACGAG GGCGAGGTGC TCGTGCGCGG CGAGTTTCGG
CCTGTGATCG GCCGCGTCTG CATGGATCAG CTGATGGTGG ACGTGACGGG GCTCGACGTG
GCGACGGGCG ACGTGGTGGC GCTCTTCGGC TACGATGCGC CCGCCCTCTG GCGCGCGGGG
TGGTGGAGCC GCCTGCGCCC GGAAGAACGT GTGGCCCGCG TGCAGGAAAC GTATCGAATG
GCGTCGAATT TGGGAGAGAG GCGCGTGTTG TCGCTTCACC GGCTGGCGGA GCGGGCGCAG
ACCATCCCGT ACGAGATCTT GTGTCGCGTG CACCGCCGCG TGCCGCGCGT CGTGTGCGAT
TGA
 
Protein sequence
MYRPLFAVID LAHLSHNIRY LKSRLRPGAS LMVAVKADAY GHGVRAVVGR LVREGVHHVA 
VASLEEALEI RAFHRGVNIL VLGAVTPDAC MKAAEAEVEI ALTDLSPIDE IPRLPKRLRV
HLPLDTGMNR LGVKRTDEAV ALARAIAKRE DLELVGAGTH LAAADAEDPA HAAGQMERLG
AFVRALEQAG LRPPRIHAGN SAALLRNPAW HLDMVRVGIA AYGYSPDPSV LPAPSLRPVM
SLYAGVLRVA QAQPGETVGY GATFTVTRPM TIATVAGGYA DGYPRHLSNE GEVLVRGEFR
PVIGRVCMDQ LMVDVTGLDV ATGDVVALFG YDAPALWRAG WWSRLRPEER VARVQETYRM
ASNLGERRVL SLHRLAERAQ TIPYEILCRV HRRVPRVVCD