Gene Aaci_0341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0341 
Symbol 
ID8423828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp396532 
End bp397437 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content59% 
IMG OID645026467 
Product2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
Protein accessionYP_003183789 
Protein GI258510355 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase
[TIGR02313] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGCCG AAAAGGACGT GTATTCGCGC CTTCGGGGAT CCATCGTGCC GATGGTCACG 
CCGTTTTTGG AGGACGGATC GTTTGACGAG AAGTCGTATC GTGAACTCAT TGAGTGGCAG 
ATCGAGAGCG GTTCTCACGG TATCTCTTGC GCAGGAACAA CTGGAGAACC GAGTTCCCTT 
ACGATAGAAG AACGAGAATA CTTATTCGAA GTCACGATGG ATGCCGTGCG CGGTCGGGTG 
CCTGTGGTGT TGGGGACGGG CTCGACGAAC CACGCGGAGG CGCTTCGGCT CACGAAGACG 
GCTGAACGGC TGGGTGCGGA TGCCGCGCTG GTCATCGTTC CGTATTACAA CCGTCCGTCC 
CAGGAGGGGC TCTACCGGCA CTTTCGCGCG ATAGCGGACA GCGTCGACAT TCCCATCATC 
CTGTACAACA TTCCGGGACG CACCGGGGTG AACCTAGAGC CCGCCACGAT GGCCCGGCTC 
AAGCGCGACT GCCGTAACAT CATTGGCGTC AAGGAATCGA ACAAGGACTT TGAGCAGGTT 
ACACGCGTGT TCCAGGCCTG CGGCCGCGAT TTCCTGGTCT ATTCCGGCAT AGAGCTCCTG 
TGTTACCCCA TGCTCGCGCT GGGAGGAGCG GGGCATCTCA GCGCGACCGC CAATCTCATG 
CCGAGAGAAG TCGCCCGCCT GTACGACTTG GTGCAAGCCG GGAAGTGGCA TGAAGCGATC 
GATCTTCACT TTCAACTGGT CGACATCAAT GAGGCTTTGT TCTGGGAGAC GAACCCAGGT 
CCGGTCAAGG CGTGCCTTGC CATGATGGGC AAAATTCGGC CCGTGGTGAG GCCGCCGCTC 
GCGCTGCCAG GAGAGGAAAT GACGGCAAAG CTGCGAGGCG TGCTGACTTC GTATGGGCTG 
ATCTGA
 
Protein sequence
MGAEKDVYSR LRGSIVPMVT PFLEDGSFDE KSYRELIEWQ IESGSHGISC AGTTGEPSSL 
TIEEREYLFE VTMDAVRGRV PVVLGTGSTN HAEALRLTKT AERLGADAAL VIVPYYNRPS 
QEGLYRHFRA IADSVDIPII LYNIPGRTGV NLEPATMARL KRDCRNIIGV KESNKDFEQV 
TRVFQACGRD FLVYSGIELL CYPMLALGGA GHLSATANLM PREVARLYDL VQAGKWHEAI 
DLHFQLVDIN EALFWETNPG PVKACLAMMG KIRPVVRPPL ALPGEEMTAK LRGVLTSYGL 
I