Gene Aaci_0259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0259 
Symbol 
ID8423728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp284940 
End bp286052 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content63% 
IMG OID645026370 
Productxylose binding protein transport system 
Protein accessionYP_003183710 
Protein GI258510276 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4213] ABC-type xylose transport system, periplasmic component 
TIGRFAM ID[TIGR02634] D-xylose ABC transporter, substrate-binding protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.465034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCAAGA AGACATGGAA GAAGAGCGCA ACGTGGATGG CGGCGGCGGC CGTCGTGACG 
GGGATTGTCG CTGGGTGCGG CACCTCTTCG GCGAATGGGC AGGGCTCGAC GTCGACGGGC 
GCGGCGTCTG CAGTGAATCC GCACCCGAGC GTCAAAATCG CGTTTCTGAT GCCGGAGACG 
AACACGTCGC CGCGTTGGGA GTACGATGAT CGCCCGGACT TCATCGCGGC GATGAAGAAG 
CTGGATCCGA ACGCGCAGAT CATCTATGCC AACGCGCAGG GGTCTGAGGC GACGCAGCTT 
CAGCAGGTGG AAAGCGCCAT CACGGAGGGT GCGAAGCTCC TCGTCGTGGC ACCGGTGAAC 
GGGTTTGCGG CCACGACCAT CGTCACCGAG GCCGCGAAAG CGCACGTTCC CGTGATCTCG 
TACGATCGCC TCATTCAGAA CGCCAAGGTC GACTATTACG TCTCGTTCAA CAACGTCGAG 
GTCGGCAAGC TTCAGGGCGA GTACATCGCG CAGCACACCA AGAAGGGCGG CACCGTGGTC 
ATGTTGGACG GCGCGCCCAC GGATCCGAAC GCGAAGCAGT TCGCGCAGGG CGCCCATGAC 
GTCCTGGATC CGCTCTTTAA ATCGGGCAAG CTGAAGCTCG GTTATGAGCA GTTCACGCCG 
AACTGGGATT CGCAGCAGGC GCTGACCGAG ATGCAGCAGG CGCTCACGCG GCTGCACAAT 
CACGTGGACG CCGTGCTGGC TGCGAACGAC AACCTGGCGG GCGCGGCCAT CCAGGCGCTT 
GAGCAGCAGC ACATCAAGGG CATCCCCGTG ACAGGCCAGG ATGCGACCGA CGCCGGCCTG 
CACCGGATTT ATTACGAAGG CACCCAGTCG ATGACGGTGT ACAAGCCCAT CAAGGAAGAG 
GCCAACGCAG CGGCTCAGCT GGCGTATGAC CTCATCACGG GCAAGAAGCC GCCGGCATCG 
CTCGTGAATG GCACGGTGAA CAACGGTGCC ACGAACGTGC CGTCCGTGCT CCTGCAGCCC 
ATCGTTGTGA CGAAGTCGAA CGTCGCAAGC ACGGTCATCA AGGACGGCTT CACGACCTGG 
GCGCGCATCA AGAACCCGGC AGAGCAGCAG TAA
 
Protein sequence
MAKKTWKKSA TWMAAAAVVT GIVAGCGTSS ANGQGSTSTG AASAVNPHPS VKIAFLMPET 
NTSPRWEYDD RPDFIAAMKK LDPNAQIIYA NAQGSEATQL QQVESAITEG AKLLVVAPVN 
GFAATTIVTE AAKAHVPVIS YDRLIQNAKV DYYVSFNNVE VGKLQGEYIA QHTKKGGTVV 
MLDGAPTDPN AKQFAQGAHD VLDPLFKSGK LKLGYEQFTP NWDSQQALTE MQQALTRLHN 
HVDAVLAAND NLAGAAIQAL EQQHIKGIPV TGQDATDAGL HRIYYEGTQS MTVYKPIKEE 
ANAAAQLAYD LITGKKPPAS LVNGTVNNGA TNVPSVLLQP IVVTKSNVAS TVIKDGFTTW 
ARIKNPAEQQ