| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_0214 |
|---|
| Symbol | |
|---|
| ID | 8423683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 234274 |
|---|
| End bp | 235209 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 645026326 |
|---|
| Product | protein of unknown function DUF6 transmembrane |
|---|
| Protein accession | YP_003183666 |
|---|
| Protein GI | 258510232 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5006] Predicted permease, DMT superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCTT CGTGGGTGGG CGCCGTGTGT CTGGCGCTCG CGGCCTCCCT TTGGGGCGGC
ACGTATGTGG TGAGCAAAGC GGTCATGGAT TGGGTGGACC CGTCGGCGCT CATCTGGTTG
CGGTACGCGC TCGGCGTCGT CGCGCTTGCC GTGGCGGGCC TCGTGCGGCG GGTGAAGTGG
CGAATTGCCG CGCGCCATCT CGTCACGGTT GCCGCCATCG GCCTCGTTGG CTACGCGCTT
TCCATCTGGG CGCAATTTGT TGGGACGCAA TGGTCGACGG CGCAGATGGG CGCCGTCATC
ACCTCGGGTA CGCCGGCGTT CATGGTGATC TTCGCGCGCC TGCTCCTGGG CGAAGCCATC
ACGTGGAGGC GGGCCGCGTC TGTGATGCTC GCGACGCTCG GTGTGATCGT CATGATTGGC
GTCGGCCACC AGGCGAACAG CCGCGTCGCG TGGGGCGGTC TGATTCTGCT CGTCGCGGCT
GTCACCTGGG GGCTTCAGTC CGTGCTCGTG AAGCGCGTGC CTTCTGAATA TTCCTCCATT
GTCGTCACGG CGTACGCGAT GCTCGTCGCC CTCGCCGTGA TGACGCCTCT CGGTTGGCCG
CACATGCCGA GCCTGAGGAC GATTTTGGGT CACACGTGGG TGTGGATGGG TAGTCTTTAT
CTCGGCGTGT TGTCCACGGC CGGCGCGTTT CTCCTTTGGA ATGAGGGGTT GCGGCGAATG
CCGGCGGGAT CGGGCGCCGT GTACTTCTTT CTGCAGCCTC TCGTGGGCAC CGCGCTCGGG
TGGCTCGTGC TGGGGGAAAC CGTCTCGGCC TCCTTTTGGC TGGGGGCCCT GCTGATTCTT
GGGGGCGTGG CGCTCGTGGT CCGCGAACCG GGGCCTTCCG CGACTTCTCG GAGATGGGCG
CGGTCGCCAT CCAAAGAAGG GTCTCAGGAC TCATGA
|
|---|
| Protein sequence | MKASWVGAVC LALAASLWGG TYVVSKAVMD WVDPSALIWL RYALGVVALA VAGLVRRVKW
RIAARHLVTV AAIGLVGYAL SIWAQFVGTQ WSTAQMGAVI TSGTPAFMVI FARLLLGEAI
TWRRAASVML ATLGVIVMIG VGHQANSRVA WGGLILLVAA VTWGLQSVLV KRVPSEYSSI
VVTAYAMLVA LAVMTPLGWP HMPSLRTILG HTWVWMGSLY LGVLSTAGAF LLWNEGLRRM
PAGSGAVYFF LQPLVGTALG WLVLGETVSA SFWLGALLIL GGVALVVREP GPSATSRRWA
RSPSKEGSQD S
|
|---|
| |