Gene Aaci_0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0109 
Symbol 
ID8423575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp127602 
End bp128063 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content56% 
IMG OID645026219 
Productlarge conductance mechanosensitive channel protein 
Protein accessionYP_003183562 
Protein GI258510128 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1970] Large-conductance mechanosensitive channel 
TIGRFAM ID[TIGR00220] large conductance mechanosensitive channel protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTCGGG AGTTTTTCAA GGACTTTCGA GCGTTTATCC GACGCGGGAA CGTGATGGAT 
CTGGCCGTCG CTGTCATCAT TGGCGGGGCG TTTGGGCAGA TGGTCACCGC GCTCGTCAAT 
GACGTCATCA TGCCGCCCAT TGGGCTTTTG CTTGGCAAAG TCGACTTCAG CAACCTGTAC 
ATCAATCTGT CCAAGAAGCA TTATCCATCT CTCGCCGCGG CCAAAGCCGC CGGTGCCCCT 
ATCATCCAGT ACGGGTTGTT CCTCAACACG GTCGTCAATT TTCTGATTGT CTCGCTTGTG 
ATCTTCGTCG CGATCCGGCA GCTCAGCCGG CTGAAGAAGC CGGAACCTGT GAAGGCTCCG 
AACACGAAGA CCTGCCGTTT TTGCCGATCC GAGATTCCGC TCGAGGCTCT ACGCTGCGCG 
TATTGCACCT CGTTTGTGGA GGGCGAAGTC GAGGAGGCGT AG
 
Protein sequence
MFREFFKDFR AFIRRGNVMD LAVAVIIGGA FGQMVTALVN DVIMPPIGLL LGKVDFSNLY 
INLSKKHYPS LAAAKAAGAP IIQYGLFLNT VVNFLIVSLV IFVAIRQLSR LKKPEPVKAP 
NTKTCRFCRS EIPLEALRCA YCTSFVEGEV EEA