Gene Aaci_0077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0077 
Symbol 
ID8423539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp96313 
End bp97248 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content65% 
IMG OID645026183 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003183530 
Protein GI258510096 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCAAGG CCGCCGAAGC CGTGATCGCA CAGGTGGAAG GGGAGAGGCG CTCCGCGCGA 
GGCAGCATGT CGCTTCAAAT CACCGGCCTC GCGATGATGG CGCCCGCGCT TCTCTTCCTG 
CTCGCGTTCG TGTTTGTGCC GATGGGCTAC GCGGTGTACC TGAGCCTGTA CCAGTCGACG 
CTGTACACCC CGCAACCGGT GTTCGCCGGA TTCGCCAACT ACGCGCACCT GCTTGCCGCG 
CCCGATTTTT GGCAGGCGGC GTCGAACACG CTGTGGCTGG CCGTCGGCAT GATGGCGCTG 
TCGCTGCCCG TGGCCCTTGT GCTCGCCCTG CTTCTGAACC AGCGCATCCG CGGGCGGGCG 
TTGTTCCGCG CCGCCGTCTT CGGCCCGTAC GTAATTCCGC TCGTGAGCTC AGGCCTCATC 
TTCTCGCTTC TCTTCGCCAC GGACGGGGGA CCGGTGAATC TGGCGCTTCA GCGCCTCGGC 
CTGTCGCCGG TCAACTGGCT CGGCCAAGGG CGGACGGCGC TTCTGTCCGT GCTCATCCTC 
ACCGCGTGGC AGTTCACCGG CTATTACGCC ATCATCTTCC TCGCCGGTCT GCAGAGCGTG 
CCGACGTCCC TGATGGAGGC GTGCCAGGTG GACGGCGGCG GGCGGTGGCA GGTATTTCGC 
CACGTGACGC TGCGCGCGCT CGGGCCAAGC CTGTTCTTCG CCGTCGTCAT CTGCCTCATC 
CAGACGTTCC AGACCTTTGA TCAGGTGTAC GTCATGACCG GAGGCGGTCC AGACGGCGCG 
ACCACCACGT TCGCCTATTA CATCTTCGAG AAAGGCTTTC AAGCGTTCAA CATCGGGGAG 
TCTTCAGCGG CGAGCGTCAT CCTGATCCTC GTGCTCGCGT GCCTCTCGTA CCTGCAGATG 
CGCTTGAGCC GCCGATGGGT GGTGGAGGAA TCGTGA
 
Protein sequence
MAKAAEAVIA QVEGERRSAR GSMSLQITGL AMMAPALLFL LAFVFVPMGY AVYLSLYQST 
LYTPQPVFAG FANYAHLLAA PDFWQAASNT LWLAVGMMAL SLPVALVLAL LLNQRIRGRA 
LFRAAVFGPY VIPLVSSGLI FSLLFATDGG PVNLALQRLG LSPVNWLGQG RTALLSVLIL 
TAWQFTGYYA IIFLAGLQSV PTSLMEACQV DGGGRWQVFR HVTLRALGPS LFFAVVICLI 
QTFQTFDQVY VMTGGGPDGA TTTFAYYIFE KGFQAFNIGE SSAASVILIL VLACLSYLQM 
RLSRRWVVEE S