| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_0076 |
|---|
| Symbol | |
|---|
| ID | 8423538 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | - |
|---|
| Start bp | 95489 |
|---|
| End bp | 96316 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 645026182 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003183529 |
|---|
| Protein GI | 258510095 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGCGA ACCCTGTTCT GAAGATCGCC TCGTACGCGT TGTTGACCAT CGCGGCTGCG
CTGTGCCTGG CGCCCGTGTA CTGGATGATC CGCACGTCGC TCATGCCGAC GAATGATCTG
CTGTCCTCGG CGCTGTGGCC TGCTCACCCC GCGTGGAGCA ACTTCGCCGC CGCATGGCGC
GCTCAGCCGT TTCTCCTCTA CCTGTGGAAC AGCGTGTTCA CCAACGGCGC CATCGTCGCG
CTCCAGGTGA TCACGTCCTC GCTCGCCGCG TACGCGCTCG TCTTCATCCC GCTCCGCGGC
AAGCGCTGGC TGTTCTTCGC TGTGCTCGTG GCCATGATGG TGCCCATGCA GGCGACGTTC
GTCCCTGTCT ACACCATGCT GTCGGCGGTG CATCTCATCA ACACGTACGG CGCGCTCATC
CTGCCGTACG CCGGATCGGC CTTCGGCATC TTCCTCATGC GCCAAGGCTT TCTCACGCTG
CCGCGCGACA TCGTCGACGC CGCGCGGGTG GACGGCGCGA GCGAGTGGTG GATCCTGACC
CGCATCGTCC TGCCGAACAA CAAGCCGACC ATCGTGACGC TCGTGCTGCT CAACTTTGTC
TATCACTACA ACAGCCTGTT CTGGCCGCTC GTGGCCACCA ACACCACCAA CATGCGCGTG
GTGCCCGTCG CCCTGTCGTA CTTCCTGACG CAGGACGCGG GCCAGACGCT GCAGTGGAAC
TACGCGATGG CCTTTGACAT CTTCGCCATC GCGCCCGTCG TCATCCTGTT CCTCATCGGC
CAGCGCTACT TCGTCCAGGG CGTGGCCCAG ACGGCCGTGA AGGGATAA
|
|---|
| Protein sequence | MKANPVLKIA SYALLTIAAA LCLAPVYWMI RTSLMPTNDL LSSALWPAHP AWSNFAAAWR
AQPFLLYLWN SVFTNGAIVA LQVITSSLAA YALVFIPLRG KRWLFFAVLV AMMVPMQATF
VPVYTMLSAV HLINTYGALI LPYAGSAFGI FLMRQGFLTL PRDIVDAARV DGASEWWILT
RIVLPNNKPT IVTLVLLNFV YHYNSLFWPL VATNTTNMRV VPVALSYFLT QDAGQTLQWN
YAMAFDIFAI APVVILFLIG QRYFVQGVAQ TAVKG
|
|---|
| |