Gene Aaci_0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0060 
Symbol 
ID8423522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp76219 
End bp78291 
Gene Length2073 bp 
Protein Length690 aa 
Translation table11 
GC content68% 
IMG OID645026166 
ProductAlpha-glucuronidase 
Protein accessionYP_003183513 
Protein GI258510079 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3661] Alpha-glucuronidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACGAACA TCCCTGAGGG CGATCTCGAC TACCGCGCTT GGTTGCAGGA GAGCCCGCTG 
CCCCGCGCCG TGCCGGAAGC GGCGCGGCGG ATGGCGGTGT ACGGCCCGGC GGATGATCCG
CTCCTTTGCA CCGCGGCGGC GGAGTGGGGG CGCGCGGTCC GCGCGGCGTG CGGGGAAAGC
CCGGCGCGCT TGGCGAGAGA CCCGGGCGGT GCGCCGAGTG TGCCTTGCGT CGCCATGGGG
CTATTGTCGG CGATGCCACG CGGGCTTCGC GAGGCCGCGC AGGCTGCGCT CGCCGGCGCG
CCTTCGGACG AGGCCTACGC CATCTTGCCG GTGGATGGGC AAGGCGTCGC AGTCGTCTCG
CGGACGCCCG CCGGTGTGCT GTACGGCGTG TTCCACCTCA TCCGCCGCCT GCGGCTCGGC
GAACCGCTCC ACGAGCCTTG CGTCTCCTCA CCCAAGAACG CCTGGCGGAT GCTGGATCAC
TGGGACAACG CCGACGGCAC GATTGAGCGC GGGTACGCGG GGAAATCGCT GTTTTACCGC
GGTGGTCAAA TCGATTTTGA CGAGGGGCGC GTACGGGATT ACGCGCGGCT TTTGGCGTCT
GTCGGCGTGA ACGCCATCGC CATCAACAAC GTCAACGTGC ACGAGACCGA GACGCGCTTC
CTCACCGAGG CGCATCTGCC GGGCGTCGCG CGGCTGGCCG ACGTGTTTCG CCCGTACGGC
ATCCGGGTGT TCCTCAGCAT CAACTTCGCG AGCCCCGTCG ATCTCGGCGA CCTGCCGACC
GCGGATCCGC TCGATCCGCG CGTTGAGGAC TGGTGGCGCG CGACGGCGGA TCGCATCTAC
CGGCACATCC CGGACTTCGG CGGCTTCCTC GTGAAAGCGG ACTCCGAGTT CCGGCCCGGT
CCCTTCACCT ACGGGCGCGA TCATGCCGAC GGCGCGAACA TGCTCGCCCG AGCGCTGGCG
CCTCACGGCG GCGTGGTCAT CTGGCGGGCC TTCGTGTACA ACTGCCTCAT GGACTGGCGG
GACCGGCGCG CCGACCGCGC CCGGGCGGCG TACGATCACT TCGTGCCGCT CGACGGCCGC
TTCCTGGACA ACGTCCTGAT TCAGATCAAG AACGGGCCGA TGGACTTTCA GGTGCGCGAG
CCGGTCTCGC CGCTCTTCGG CGGGCTTTCT GCGACGAACG TGATGCTCGA GTTCCAGATC
ACGCAGGAGT ACACCGGCCA GCAGCGCCAC GTGTGCTATC TCGCGCCGAT GTGGAAAGAG
GTGCTCGACT TCGACACGCA CGCGCGCGGG CCGGGATCGA CGGTGGCCGA GATCGCGAGC
GGCAGGTTGT TCGGGCGGCC GCACGGCGGC GTGGCGGGCG TCGCGAACGT GGGCGACGAT
GTCAACTGGA CGGGGCACTC GCTGGCGCAG GCGAACCTGT ACGCGTTCGG CCGACTCGCT
TGGGATCCGT CGCTCGATCC CGCCGGGATC GCGCGGGAGT GGGCGCGGCT CACGTACGGC
GACGATCCGG ATGTCGTCCG CACGGTGGTG GGCATCCTCA TGGCCTCCTG GCCGGCGTAC
GAGGCGTACA CCGCGCCGCT CGGCGTGGGC TGGATGGTGA ACCCCGGCCA CCACGACGGG
CCCAATCCGG AGGGCTACGA GTACTCAAAA TGGGGCACGT ACCACTACGC GGATTGGCGA
GGTGTCGGCG TGGATCGGAC GATGGCCACG GGCACGGGCT ACACCGGCCA GTACCACGAG
CCGATGCGAA GCCTGTACGA GCACCTGGAG ACGTGCCCCG ACGAGCTTCT CCTCTTCTTC
CATCATGTGC CGTACACGCA CGTGCTCCAC TCCGGGAAGA CGGTCATTCA GCACATCTAC
GACGCGCACT TCGACGGCGT CGAGGCGGTG GCCTGGATGA TCGAGGCGTG GCGGCGGCTT
CAGGGGCGGA TCGATCCCGT CCGCTTCGAG CGCGTCCTCG CGCGGCTCGA GGATCAGATG
CAGCGCGCCG TCGAGTGGCG GGACGTGATC AACACGTACT TTTATCGAAA GTGTGGCATT
CCCGACGCAC GGGGGCTCCA CATCTACCCG TGA
 
Protein sequence
MTNIPEGDLD YRAWLQESPL PRAVPEAARR MAVYGPADDP LLCTAAAEWG RAVRAACGES 
PARLARDPGG APSVPCVAMG LLSAMPRGLR EAAQAALAGA PSDEAYAILP VDGQGVAVVS
RTPAGVLYGV FHLIRRLRLG EPLHEPCVSS PKNAWRMLDH WDNADGTIER GYAGKSLFYR
GGQIDFDEGR VRDYARLLAS VGVNAIAINN VNVHETETRF LTEAHLPGVA RLADVFRPYG
IRVFLSINFA SPVDLGDLPT ADPLDPRVED WWRATADRIY RHIPDFGGFL VKADSEFRPG
PFTYGRDHAD GANMLARALA PHGGVVIWRA FVYNCLMDWR DRRADRARAA YDHFVPLDGR
FLDNVLIQIK NGPMDFQVRE PVSPLFGGLS ATNVMLEFQI TQEYTGQQRH VCYLAPMWKE
VLDFDTHARG PGSTVAEIAS GRLFGRPHGG VAGVANVGDD VNWTGHSLAQ ANLYAFGRLA
WDPSLDPAGI AREWARLTYG DDPDVVRTVV GILMASWPAY EAYTAPLGVG WMVNPGHHDG
PNPEGYEYSK WGTYHYADWR GVGVDRTMAT GTGYTGQYHE PMRSLYEHLE TCPDELLLFF
HHVPYTHVLH SGKTVIQHIY DAHFDGVEAV AWMIEAWRRL QGRIDPVRFE RVLARLEDQM
QRAVEWRDVI NTYFYRKCGI PDARGLHIYP