Gene Aaci_0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0028 
Symbol 
ID8423490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp37187 
End bp38470 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content64% 
IMG OID645026134 
Productisocitrate lyase 
Protein accessionYP_003183481 
Protein GI258510047 
COG category[C] Energy production and conversion 
COG ID[COG2224] Isocitrate lyase 
TIGRFAM ID[TIGR01346] isocitrate lyase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATACT TCAAAACGGC GGCGGAACTG GAGCAGCATT GGAAGACGGA TCCTCGTTGG 
AAAGGCGTCG AGCGCGCCTA TACGGCCGAA GACGTGATTC GGCTCAGGGG ATCGGTGCAC
ATTGAACACA CACTCGCGCA GATGGGCGCG GAGAAGCTGT GGCGGGGTCT CCATGAAGAC
GGCTTCATTC GCGCGCTCGG TGCCCTGACC GGCAACCAGG CCGTGCAACA GGTGAAAGCG
GGGCTGAAGG CCATCTACGT CAGCGGCTGG CAGGTGGCGG CGGACGCCAA CCTGGCTGAG
CATATGTACC CGGATCAGAG CCTGTATCCG TCCAACAGCG TGCCGAGCCT CGTGCGGCGC
ATCAACAACG CGCTGTTGCG CGCGGATCAG ATTCAGACCG CGGAAGGCAA GGGCGACATC
GACTGGATGG TGCCGATTGT GGCCGACGCC GAGGCAGGCT TCGGCGGGCC GCTGAACGTG
TTCGAACTCA TGAAGATGAT GATTGAGGCC GGCGCCGCGG GCGTTCACTT CGAAGATCAG
CTGTCATCGG AGAAGAAGTG CGGTCACATG GGCGGCAAGG TGCTCATCCC CACGTCGCAC
GCGGTGCGGA ATCTGACGGC CGCCCGTCTC GCTGCCGATG TGCTCGGCGT GCCGACGGTC
ATCGTGGCGC GCACAGACGC CAACGGCGCG TTCCTCATCA CGAGCGATGT CGACGATCGC
GACGCGCGGT TCATCACCGG CGAGCGCACG CCGGAAGGGT TCTACCGGTT CCGGGGCGGG
CTGGAGGCCG CAATTGCCCG CGGACTCGCT TATGCGCCGT ACGCGGACAT GATCTGGTGC
GAGACGTCCG AGCCGAACAT CGAGGAAGCG AAGCGGTTTG CGGAGGCCAT CAAGGCCGAA
TTCCCGGATA AACTTCTGGC CTACAACTGC TCGCCCTCTT TCAACTGGCG GAAGAAGCTC
GATCCGAAGA CCATCGAGGA GTTCCAGGAG ATCATCGCGT CGTTCGGCTA CAAGTTCCAG
TTCGTGACCC TGGCGGGCTT CCACGCCCTC AACTACAGCA TGTTCGAGCT CGCGTATGGC
TACAACCAGC GCGGCATGGG GGCGTACTCG GACCTGCAGC AGCAGGAGTT CGCGGCGGAG
GCCCGTGGCT ACACGGCGAC ACGCCATCAG CGGGAGGTGG GCACGGGCTA CTTCGATGAA
GTGGCGCAGG TGGTGTCGGG CGGGCTCTCG TCCACGACGG CGCTCACCGG CTCCACGGAG
GAGGAGCAGT TTGTGGAGGC GTGA
 
Protein sequence
MTYFKTAAEL EQHWKTDPRW KGVERAYTAE DVIRLRGSVH IEHTLAQMGA EKLWRGLHED 
GFIRALGALT GNQAVQQVKA GLKAIYVSGW QVAADANLAE HMYPDQSLYP SNSVPSLVRR
INNALLRADQ IQTAEGKGDI DWMVPIVADA EAGFGGPLNV FELMKMMIEA GAAGVHFEDQ
LSSEKKCGHM GGKVLIPTSH AVRNLTAARL AADVLGVPTV IVARTDANGA FLITSDVDDR
DARFITGERT PEGFYRFRGG LEAAIARGLA YAPYADMIWC ETSEPNIEEA KRFAEAIKAE
FPDKLLAYNC SPSFNWRKKL DPKTIEEFQE IIASFGYKFQ FVTLAGFHAL NYSMFELAYG
YNQRGMGAYS DLQQQEFAAE ARGYTATRHQ REVGTGYFDE VAQVVSGGLS STTALTGSTE
EEQFVEA