Gene Aaci_0022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0022 
Symbol 
ID8423484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp29487 
End bp30161 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content51% 
IMG OID645026128 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003183475 
Protein GI258510041 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGAGC GAATGGACCA GTGGTTGACC GAGTTGGTGC GTCTAAACGA GGATGACCGC 
GTGACCGACC GACAATTGAA CATCTTACGC GCGGCGGTGG AAGTGTTCGC GGAGAAGGGT 
TTTGCTGCTG CGTCCACGAG CGAGATCGCA CAGCGGGCAG GCGTGGCCGA AGGCACCATC 
TTCAGACACT ATAAGACAAA GAAGGATTTG CTTCTTTCCA TCACGGTACC GGTGATCGAT 
GAATTTGTCG GACCGTTCTT GCTCCGAGAT CTCGAGACCA TTCTTACTGC CCAACACGAA 
CGGTTTGAAG ACTTTCTACG AGCCGTATTG TTTAACCGCT TGCAATTTGC AAAGAAATAT 
GCTCAAGTTC TGAGGATTTT AGCTCAAGAA ATACCTTTTC ATCCCGAGTT GAAGGCGCAA 
CTCAAGCAAT ATGTCACCGA GAATGTGTTG AAGCGCCTAG TCGGGATTAT TGAACACTTT 
CAGGAAAAAG GGGAGATTGC GCGGATTCCC GCGCGGACTG TGATCCGGCT AACGGTGTCA 
GTCATCCTAA GCCATGTGGT GTTGCGTCAC ATCCTGTTTC ACGATGCACC CTGGCGAGAT 
GATGAGGAAA TTGAGATGAC TGTTCGTTTC ATTGTGCAGG GTTTAAGGCC GGACGCGAGC 
AGAGACCAGA AATAA
 
Protein sequence
MSERMDQWLT ELVRLNEDDR VTDRQLNILR AAVEVFAEKG FAAASTSEIA QRAGVAEGTI 
FRHYKTKKDL LLSITVPVID EFVGPFLLRD LETILTAQHE RFEDFLRAVL FNRLQFAKKY 
AQVLRILAQE IPFHPELKAQ LKQYVTENVL KRLVGIIEHF QEKGEIARIP ARTVIRLTVS 
VILSHVVLRH ILFHDAPWRD DEEIEMTVRF IVQGLRPDAS RDQK