Gene Aaci_0014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0014 
Symbol 
ID8423475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp19295 
End bp20575 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content65% 
IMG OID645026120 
Productseryl-tRNA synthetase 
Protein accessionYP_003183468 
Protein GI258510034 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0172] Seryl-tRNA synthetase 
TIGRFAM ID[TIGR00414] seryl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.192456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGATA TCCGAGCCAT TCGGCAACAA CCCGACGTGT TCAAAGCGAA GCTCAAGCGG 
AAGAAGGTCG ATCCGGCCGA GATCGACCGG CTGCTCGAGG CGGACGCCAG ATGGCGGGAT
CATCTGGCGG AGGTGGAGCG CCTCAAAGCG CTGCGCAATC AGACGTCCGA GGCCATCGCG
CGCAAGAAGC GGCAGGGGGA GGACGCGAGC GAGGACATCG CGCGGATGCG CGAGGTGTCG
GACCGGATTC AGGCGCTGGA CGAAGAGGTT CGCGAGTTGG AGCGGCAAGT GCGGGACCTG
CTGCTCGCGC TGCCGAACGT GCCGCACGAC TCGGTGCCGG ACGGCGAGTC GGAGGACGAC
AACCCGGTCA TCAAGACGTG GGGAGATCTT CCGAAGTTCT CCTTCGAGCC GAAACCGCAC
TGGGAGATTG CGGAGGCGCT CGACATCGTC GACAGCGAGC GCGCCGTGAA GATCACCGGC
AGCCGCTTCG TGCTGTACAA GGGCCTCGGC GCACGGCTGG AGCGGGCGCT CGCGAACTTC
ATGCTCGATT TCCACGTGGA GCGGCACGGC TACACGGAGA TGTTTCCGGC GTTCATCGCG
AACGAGGAGA GCCTCATCGG CACGGGCAAC CTGCCGAAGT TCGGCGACGA GATGTTCAAA
ATCGAGGGGT TGCCCTACTA CCTCATCCCG ACGGCCGAGG TGCCGCTCAC GAACTACTAC
CGGGACGAGA TCCTGTCGGC CGACCAACTG CCGGTGAAAT TCGCGGGCTA TTCGGCCTGC
TTCCGCTCGG AGGCCGGATC GGCGGGGAAG GATACGCGCG GGCTGATTCG GCTGCACCAG
TTCCAGAAGG TGGAGCTCGT CAATCTGTGC CTTCCGGAGC AGTCGTACGA GGTCCTCGAG
CAGCTGACGC GCGAAGCGGA GGCTGTGCTC GAGGCGCTCC AGCTTCCGTA CCGCCGCATT
GAGATCTGCA CGGGCGATCT CGGCGCGAAG GACGCGAAGA AGTACGACAT CGAGGTCTGG
CTGCCGGCGC AGAACCGGTA CCGCGAGATC TCGTCGTGCA CGAACTTCGA AGACTACCAG
GCGCGGCGCG CCAACCTGCG CTTCCGGCGG GAGGAGCGGG GCAAACCGGA GTTCGTGCAC
ACGCTGAACG GCTCCGGCCT CGCCATTGGG CGCACGGTGG CGGCCATCCT GGAGAACTAC
CAACAGGAGG ACGGATCGGT CCTCATTCCG CGCGCGCTCG TGCCGTACAT GGGCGGGATC
GAGCGGATTG CGAAGGGCTG A
 
Protein sequence
MLDIRAIRQQ PDVFKAKLKR KKVDPAEIDR LLEADARWRD HLAEVERLKA LRNQTSEAIA 
RKKRQGEDAS EDIARMREVS DRIQALDEEV RELERQVRDL LLALPNVPHD SVPDGESEDD
NPVIKTWGDL PKFSFEPKPH WEIAEALDIV DSERAVKITG SRFVLYKGLG ARLERALANF
MLDFHVERHG YTEMFPAFIA NEESLIGTGN LPKFGDEMFK IEGLPYYLIP TAEVPLTNYY
RDEILSADQL PVKFAGYSAC FRSEAGSAGK DTRGLIRLHQ FQKVELVNLC LPEQSYEVLE
QLTREAEAVL EALQLPYRRI EICTGDLGAK DAKKYDIEVW LPAQNRYREI SSCTNFEDYQ
ARRANLRFRR EERGKPEFVH TLNGSGLAIG RTVAAILENY QQEDGSVLIP RALVPYMGGI
ERIAKG