Gene Aaci_0001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0001 
Symbol 
ID8426153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp112 
End bp1476 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content60% 
IMG OID645026104 
Productchromosomal replication initiator protein DnaA 
Protein accessionYP_003183455 
Protein GI258510021 
COG category[L] Replication, recombination and repair 
COG ID[COG0593] ATPase involved in DNA replication initiation 
TIGRFAM ID[TIGR00362] chromosomal replication initiator protein DnaA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00039195 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATGAGTA CCAAAGTCGA TCCGACCTAC GACGCGCTGT GGAACCAGGT CCTCCAGATG 
GTTCAGGACA AGGTCTCCGG GCCCACCTAC AGCACCTGGT TCGAGGACAC CCACATCGTC
CGAATCGATG AGTCGGAGCA AACGGTCTAC ATCTCCGCGC CCTCCACATT CGTACGCAAC
TGGCTGTCCG AACATTACAC TTCCCTCGTC GAAACGCTGA TGATGACCCT CATGGACCGC
GAGTATCGGG TGCGATTTAT CACAGAGGAC GACGTGCAGG CCCCCGCCGT GATCGTTCGG
CGCGCGCCCG AACCGGTGAC AGCCGAAGAA GACACGGAGA CCAACCTCAA CCCCCGTTAC
ACGTTTGACT CGTTCGTCAT CGGCGCGGGC AACCGCTTTG CACACGCCGC GTGCCTCGCC
GTTGCAGAGC GTCCTGCGAA CGCGTACAAC CCGCTCTTCA TCTATGGCGG CGTGGGGCTT
GGGAAGACGC ACCTCATGCA CGCCATCGGG CACTACGTGC GCCAACATTA TCCGAATTTC
AAAGTCAGTT ACATATCCTC CGAGCGATTT ACGAACGAGT TCATCGCGGC CATCCGCGAC
AAGAACCCCG ACTCGTTCCG AGCTCGCTAC CGCACCGTCG ATGTGCTTTT GATTGACGAC
ATTCAGTTCA TCGCGAACAA GGAACAGACG CAGGAGGAGT TCTTCCATAC CTTCAACAGT
CTTCACGAGG TCGGAAAGCA AATCGTCATC TCGAGCGATC GCCCGCCTCG GGAGATTCCG
ACGCTTGAAG ACCGGCTTCG TTCGCGTTTC GAATGGGGGC TCATCACCGA CATCCAACCG
CCCGATCTCG AGACGCGCAT CGCCATCCTG CAGCGCAAGG CGAAAGCGGA CGGCTTGGAC
GTTCCCGTCG ACGTGCTCGC CTTCATCGCC AACCAAATCG ACTCGAACAT CCGGGAACTC
GAGGGCGCGC TCACGCGAGT CATTGCGTAC TCTTCGCTCG TGAAGGAAGA TCTCAGCGTG
GCCCTCGCCG AGGAAGCCTT GAAGGACCTC ATCCACCCGA ACCGCCCCCG CGCGGTGACG
GTGAATCACG TCCAGAAAGT GGTGGCCGAT CACTACGGTC TCAAGGTCGA CGACCTGAAG
GGCAAGAAGC GGACGCGGAA TATCGCGTTC CCTCGCCAGA TTGCGATGTA TCTGACGCGC
GAGCTGACGG ATCTCTCGCT GCCCCGCATT GGAGAGGCCT TCGGCGGGCG AGATCACACG
ACGGTCATGC ACGCCTGCGA ACGGGTGCAC GAGGAAATGA TGAGGGACGA CGAGCTGCGC
GCCACCATCG AGCGGCTCAG CCAAGCGATA AGGACACTCA CCTAA
 
Protein sequence
MMSTKVDPTY DALWNQVLQM VQDKVSGPTY STWFEDTHIV RIDESEQTVY ISAPSTFVRN 
WLSEHYTSLV ETLMMTLMDR EYRVRFITED DVQAPAVIVR RAPEPVTAEE DTETNLNPRY
TFDSFVIGAG NRFAHAACLA VAERPANAYN PLFIYGGVGL GKTHLMHAIG HYVRQHYPNF
KVSYISSERF TNEFIAAIRD KNPDSFRARY RTVDVLLIDD IQFIANKEQT QEEFFHTFNS
LHEVGKQIVI SSDRPPREIP TLEDRLRSRF EWGLITDIQP PDLETRIAIL QRKAKADGLD
VPVDVLAFIA NQIDSNIREL EGALTRVIAY SSLVKEDLSV ALAEEALKDL IHPNRPRAVT
VNHVQKVVAD HYGLKVDDLK GKKRTRNIAF PRQIAMYLTR ELTDLSLPRI GEAFGGRDHT
TVMHACERVH EEMMRDDELR ATIERLSQAI RTLT