Gene Elen_3098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_3098 
Symbol 
ID8417434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp3603761 
End bp3604918 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content63% 
IMG OID645026078 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_003183429 
Protein GI257792823 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.509328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00141201 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCGATT TCTCTAAGAC CGAGGAACAG GAACTGCTCA TCGAAAGCAT CAAAGAGCTT 
CTCGAGCGCG AGATGCCGGC CGAAAAGGAG CGCGAATGCT ATCGCAACGG CGAGTTCCCC
TGGGATGCTT GGAAGGCCAT GGCCGAGGCC GGCTTCACGG GCTTGGGCCT GCCTGAAGAA
GTGGGCGGCA CCGACGTCGA CCTCATGACG GTGGCCCTGG CCAACTTCAC CATCTCCCGC
TACGGCGGCC CGCTTGCCGC GTTCTACTCC ATGGGCATGC CCACGATGTA CGACGTGTGC
GAGTTCGGCA CGCCCGAGCA GATCGAGAAG TACGTGAAGC CTTACATCGC GGGCGGGGCG
CCGCTGGCCC TGGGCATCTC CGAGCCCTCC ACCGGCTCCG ACGTGGCCGG CATGCAGACG
TCCTACGCGT GGGACGGCGA CACCGCGGTC ATCAACGGCG GCAAGCACTA CACCACCTGC
GGCATGGAAG CTCCGGCCAT CATCGTCATC GCCAAGGATC CGACGGTTGA CAACGTCCAT
CGCGGTGCGA CGATGTTCTT GGTCGATCGC GACACCCCCG GTGTGACTAT CAACAAGCTT
CCCAAGATGG GCCACGAGAA CGCCCCCACC AGCATCTGCG AGGTGTTCCT GAACGACGTG
CGCGTGCCCC GATCGGCTAT CCTGGGCGTC GAGCACAACG GCTTCATGCA GACCATGGCG
AACTTCACCC GCGAGCGCAT CGCCAACGTG TCCGGCGTCA TCGCCACGGC GGTCAATGCG
TTCGAGGATG CCTGCGCCTA CGCCAACCAG CGCGAGCAGT TCGGCCAGCA GATCGGTCGC
TTCGAGCTGG TGCAGGAGAT GATCATGGAA ATGTCCTGCA AGATCGAGAA CATGATGAAC
ATGCTGTACA AGCTGTGCTG GCAGGCCGAT CAGGGCCAGG ACGTGCGCAT CCTCGCCGGC
ATGGCCAAGT ACTACTGCTC CAAGGCCACC TGCGAAGTGG TTGACGACGC CATCCAGGTG
CTGGCAGGTA TCGGCGTGGT GGGCGACCAT CGTGTGGGCC GTTACTACAT CGACATCCGC
AGCGCCCGCA TTGCCGGCGG TTCCGACCAG GTCATGGTGT TCAACACCGC TCCGCAGATC
CTCAAGCGCT ACCGGTAA
 
Protein sequence
MIDFSKTEEQ ELLIESIKEL LEREMPAEKE RECYRNGEFP WDAWKAMAEA GFTGLGLPEE 
VGGTDVDLMT VALANFTISR YGGPLAAFYS MGMPTMYDVC EFGTPEQIEK YVKPYIAGGA
PLALGISEPS TGSDVAGMQT SYAWDGDTAV INGGKHYTTC GMEAPAIIVI AKDPTVDNVH
RGATMFLVDR DTPGVTINKL PKMGHENAPT SICEVFLNDV RVPRSAILGV EHNGFMQTMA
NFTRERIANV SGVIATAVNA FEDACAYANQ REQFGQQIGR FELVQEMIME MSCKIENMMN
MLYKLCWQAD QGQDVRILAG MAKYYCSKAT CEVVDDAIQV LAGIGVVGDH RVGRYYIDIR
SARIAGGSDQ VMVFNTAPQI LKRYR