Gene Elen_3001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_3001 
Symbol 
ID8417334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp3484326 
End bp3486560 
Gene Length2235 bp 
Protein Length744 aa 
Translation table11 
GC content68% 
IMG OID645025979 
Productdomain of unknown function DUF1727 
Protein accessionYP_003183333 
Protein GI257792727 
COG category[R] General function prediction only 
COG ID[COG3442] Predicted glutamine amidotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.954679 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTTGC AGTTCGCCGG CGCGCGCGCC GTCAGCGCCG TTTCAACGTG GGGTCTCAAA 
AACGTGTTCC GCCGTCCCGC CGCGAACTTC CCGGGCAAAA TCGCGCTGTA CGTGGATCCG
CGTCTCATTG CCGACCTCGC GCCGAAGCTG GAGCAGGGCT CGGTGTGCGT GGTTGGAACG
AACGGAAAGA CCACGGTGAC GAACCTGCTG GCCGACGCGC TTGAGCTGGC GGGCCAGCGC
GTGGTGTGCA ACCGGACCGG CGCGAACCTG GACTCGGGCG TGGCGACGTC GCTGCTGCAC
GCCGGCCCGT CGGATTGGGG CGTGTTCGAG TGCGACGAGC TGTGGCTGGC GAAGATCCTG
CCGCAGCTGC AGGCCACCTA CGTGGTGCTG CTCAACCTGT TCCGCGACCA GCTGGACCGC
GTGGGCGAGA TCGACCGCAT CCAGGACAGC ATCGTGGGCG CGCTGGAGAA GTCGCCGGAC
ACGGTGCTGG TGTACAACGC CGACGACCCG CTGTGCGTCC GCATCGCCGA GCGCGCGGCG
AACCCCTCCA TCGCGTTCGG CGTGGACGAG GACCTGGGGC TGCCGCAGAA TTCGGTGGCC
GACGCGCAGA TGTGCCAGCG CTGCTCGTCC ATGTTGGAAT ACGACTATCG CCAGTACGGG
CAACTGGGAT CGTTCTCGTG TCCCACCTGC GGGTTCGCGC GTTCCGCCCT GGACTTCGCG
GCAACGGGCG TGAAGCTGGG CCTGAACGGG TTGTCGTTCG ACGTGCGTCG GGACGGCGAG
GGGGCAGCCG CGGGTTCGAT CGCCGCGCCG TACACCGGCG CGTACATGGT GTACAACTTG
CTGGCAACCG CTGCCGCGGC CGGCCTCGCC GGTTGCCCGC TTCCCGCGTT GCAGAAGGCC
ATCGACGCCT TCGACCCGCA GAACGGGCGC CTGCAAACGT TTGACATCGC CGGTCGGCGC
GTGCTGCTGA ACCTCGCGAA GAACCCCACC GGCTTCAATC AGAACCTCAA GATCGTGGCG
CAGGACGCGG GTGACAAGGT GGTAGCCTTC TTCGTGAACG ACAAGGAGGG CGATGGCCGC
GACGTGTCGT GGCTGTGGGA TATCGACTTC GAGGAGCTGG CGGACGATCC GGCCAAGCTC
ACCGTGTTCG CGGGCGGCTT GCGCGCGAAC GACATGCAGG TGCGCTTGAA GTATGCCGGC
ATCGAATCGC AGGTGGTTGC GGATGCCGAG GACCTGCTGG CGCGCATAGC CAGCCTGTCG
GCCGAAGAAA ACGCGTACCT GATCGCGAAC TACACCGCAT TGCCCCCGGT GCATGCGGTG
CTGACCAGCC ACGGCGCGGC GGGCGCCGCG GCCGAGGATT CCGCCAACCC GCATGGCACG
GATGAGGGCT TCCCCCGCCC CCATGGCGCG GGCGATGGCT GTGGGGGCGA CCGTTCCGTC
TCCGCGCCAG GAGAGGGGGA GACTCCTGCG CCCGCCGCCT CCCTCACCAT CGCGCACCTC
TTCCCCGACC TGCTCAACCT GTACGGGGAC GGTGGCAACG TGCGCATCCT CGAACAGCGC
CTGCGCTGGC GCGGCATCCC CGTGGAGGTC AAGCGCGTCA ACCACGGCCA GGCCATCGAC
CTCTCCGGCG TCGACCTCGT CATGCTGGGA GGCGGCCCCG ACCGCGAGCA GCGCCTGGCG
TCGGCCGAGC TCATGAACAT GCGCGAGCAG CTGCATGCCT ACGTGGAGGA CGGCGGCGTC
TTGCTGGCCA TCTGCGGCGG CTACCAGATT CTCGGCCACG AGTGGCTGCT GGGCGACGAG
GTGGTGCAGG GCCTGGGCAT CGTCGACATG ACCACCGAGC GTGCGGCGGG CGGCTCCGGC
GACCGGCTCA TCGACAACAT CGTGCTGACC TCGCCGCTGG CGAAGCGCCC TGTCGTGGGT
TACGAGAACC ATGCGGGACG CACGCACCTC GGCGCGGGCG TCGAGCCCTT CGGCGCCGTG
GCGTCTTCCA CGGGGCACGG CAACAACGAT GCCGACAAGC AGGACGGCGT GCGCTACAAG
AACGTGGTGG GCACGTATCT GCATGGCCCG CTGCTGGCGA AGAACCCCGA GGTTGCGGAC
GATTTGCTCG CACGCGCTCT CCAACGTTTC GCATCGCGAA CGGGCCAGCC GGCCATCGAG
TTGGCGCCGC TCGACGACGC CGTCGAGCAA GATGCGAACG ACGCCATGGT CAAGAAGCTG
GGAGTGCACA GGTAG
 
Protein sequence
MGLQFAGARA VSAVSTWGLK NVFRRPAANF PGKIALYVDP RLIADLAPKL EQGSVCVVGT 
NGKTTVTNLL ADALELAGQR VVCNRTGANL DSGVATSLLH AGPSDWGVFE CDELWLAKIL
PQLQATYVVL LNLFRDQLDR VGEIDRIQDS IVGALEKSPD TVLVYNADDP LCVRIAERAA
NPSIAFGVDE DLGLPQNSVA DAQMCQRCSS MLEYDYRQYG QLGSFSCPTC GFARSALDFA
ATGVKLGLNG LSFDVRRDGE GAAAGSIAAP YTGAYMVYNL LATAAAAGLA GCPLPALQKA
IDAFDPQNGR LQTFDIAGRR VLLNLAKNPT GFNQNLKIVA QDAGDKVVAF FVNDKEGDGR
DVSWLWDIDF EELADDPAKL TVFAGGLRAN DMQVRLKYAG IESQVVADAE DLLARIASLS
AEENAYLIAN YTALPPVHAV LTSHGAAGAA AEDSANPHGT DEGFPRPHGA GDGCGGDRSV
SAPGEGETPA PAASLTIAHL FPDLLNLYGD GGNVRILEQR LRWRGIPVEV KRVNHGQAID
LSGVDLVMLG GGPDREQRLA SAELMNMREQ LHAYVEDGGV LLAICGGYQI LGHEWLLGDE
VVQGLGIVDM TTERAAGGSG DRLIDNIVLT SPLAKRPVVG YENHAGRTHL GAGVEPFGAV
ASSTGHGNND ADKQDGVRYK NVVGTYLHGP LLAKNPEVAD DLLARALQRF ASRTGQPAIE
LAPLDDAVEQ DANDAMVKKL GVHR