Gene Elen_2938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_2938 
Symbol 
ID8417269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp3411011 
End bp3412915 
Gene Length1905 bp 
Protein Length634 aa 
Translation table11 
GC content64% 
IMG OID645025915 
Productprotein serine/threonine phosphatase 
Protein accessionYP_003183271 
Protein GI257792665 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAC GAATATGCGA TGAAGACGCG ATGCGGGGGT GCTGCGTGAA AAACGACGAA 
AGGCGGGTGG AGCGGTCGTC CGGCCGAAAC GATGGGCATG CGGGAAGGCT CATTCGCAAG
CTGGCGCTCG TGTTCCTGGC GTTCGCCGTA GTGGCCGTGG TGCTCAACTG CGCACTCGCG
TACGTCAGCA CGCGCGATAC CTTCCTGCAG TCCGAAGCCT ACCGCTTGGG GCAGGTGGGC
GGTTACGCCG CGAACGCCAC TCCGCAGGCG CTTCCTTCGG ATGCATTGCA AGCGTGGAAA
GACAACGCTG ACGAGTTGGA CCCCGCGACG ACGTACGATC AGAGCCTCGC GGAAACGCAG
GGGCTGATAA GCGCTTACAA TGCCGAAGTC GACAGGCTCA AGGGGTCGGA GGAGGAGGCG
ACCGAGGAGG ATCAGGATCG TCTCGACGGC ATGCTGGCGG AGTACGAGCG AAAAAGCATA
CCCCTCTCGC TCTATTCCCT GGACGCGATG CTCGACCGGC TGCGCGCTTC GTTCAGCGTG
TCGAGGCTTG CGGTAGTTGT TCCGGACGAG CAGAACGAGA CCGTCCTCTA CGTTGCGGAG
GGGATTTCCG GCGATCAGAA GCGCGGGGTG GATGCTCACT TCTTCGGCGA CGAGGAGCAG
CGCCTCAAAG CTGACTACCC CGCCTTGTGG GAAGCGGTCG AAACCGGCGA GCCCAGCACG
GATCCCGCCC TTGCGCCGGA CGGCGAAACG TACGCTATGT ACGTGCCTTT TGCCGTGGAC
GGCCAGACCT GGGTTTACGA GGTGTCGATG GGCACCGACG AGCTGGAAGC TGCAGTGCGA
TCGCAGGTTG CCAGCACGGT GGTGGTGTCG TTCGCCGTGT TCGCGGTTTG CCTGACGGCT
ATGCTTCTGC TGCTCCGCCG CACCTTGGTG AAACCTCTCG TAGCGCTCAG CTCCCAGGTG
CGGGACTACG CTGCCAGCAA GTCCGCGGCC GTGGCCGACG TCATCCGCTC GCAGTGCTAC
CCGAAAGACG AAGTGGGCGA TCTGGCTGCC AGCACGGCCG ACATGATCGA CGAGCTGCAG
GCTCACATGG ACGACATCGC GCGCATGGGC GCCGAGCGCG AGCGGGCGCG ATCCGAGCTC
GCTGTGGCCA GCCGCATTCA GCTTTCGGCT CTGCCCACCG TGCGCCCGCC GTTCTCAGGA
TGCGATGACT TCGGGCTATC GGCATCCATG CACCCGGCAA AGGAAGTGGG CGGCGACTTC
TACGACTTCT TCCTGATAGA TCAGGATCAC TGCGGCGTGG TAATAGCCGA CGTATCCGGC
AAGGGCGTAC CGGCGGCGCT GTTCATGATG CGCGTCAAGG CTCTGCTGAA CCAGCTCCTG
CGCGAGGACC TCTCGCCCGA CCAGGTGCTT GCTCGAGCGA ACGACGGCCT GTGCGAGGAC
AACGAAGCCG GCATGTTCGT TACGGTGTGG CTTGGGGTGT TGGATTTGAG ATCCGGCAAA
TTGGTTTACG CCAACGGCGG GCACAACCCG CCGCTGTACC GACACGCTGA CGGTTCGGTC
GAGTGGATGC GCGACCGGTC GGGTCTGCTG TTGGGCAGCT TCGAGGGTGT GCCCTATTGC
GTGTTCGAGC GCACCATGAT CCGGGGCGAC TCCCTGATCC TGTACACCGA CGGAGTGACC
GAGGCCATGG ATGCGTCGGA TCATTGTTAC GGCGACGAAC GCTTGTTCCA GCTGGTGGAG
CGGGAGTGCG ACGGATACCC GGCATCCGTG TCGGGCGTTA TCGAGGAGGA CGTGCGCGCC
TTTGCGGAAG GGGCCGATCA GGCCGACGAC ATCACGCTGC TGGTGCTGCG CTACGATGGA
CAGGAAAACG GCCCCGCGGC GTCGGCGGCC GGGAATCGAG GGTAA
 
Protein sequence
MIERICDEDA MRGCCVKNDE RRVERSSGRN DGHAGRLIRK LALVFLAFAV VAVVLNCALA 
YVSTRDTFLQ SEAYRLGQVG GYAANATPQA LPSDALQAWK DNADELDPAT TYDQSLAETQ
GLISAYNAEV DRLKGSEEEA TEEDQDRLDG MLAEYERKSI PLSLYSLDAM LDRLRASFSV
SRLAVVVPDE QNETVLYVAE GISGDQKRGV DAHFFGDEEQ RLKADYPALW EAVETGEPST
DPALAPDGET YAMYVPFAVD GQTWVYEVSM GTDELEAAVR SQVASTVVVS FAVFAVCLTA
MLLLLRRTLV KPLVALSSQV RDYAASKSAA VADVIRSQCY PKDEVGDLAA STADMIDELQ
AHMDDIARMG AERERARSEL AVASRIQLSA LPTVRPPFSG CDDFGLSASM HPAKEVGGDF
YDFFLIDQDH CGVVIADVSG KGVPAALFMM RVKALLNQLL REDLSPDQVL ARANDGLCED
NEAGMFVTVW LGVLDLRSGK LVYANGGHNP PLYRHADGSV EWMRDRSGLL LGSFEGVPYC
VFERTMIRGD SLILYTDGVT EAMDASDHCY GDERLFQLVE RECDGYPASV SGVIEEDVRA
FAEGADQADD ITLLVLRYDG QENGPAASAA GNRG