Gene Elen_2929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_2929 
Symbol 
ID8417260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp3400884 
End bp3402272 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content56% 
IMG OID645025907 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_003183263 
Protein GI257792657 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGGAG CATTGGACAT ACTCAAAGTG CGGATATGGT GCGCAGTGGG GTTCACCAGC 
TATTGGGCCT GGCTGTTCCT CTTGCTTATC GCCCAGGTGT TCGGAGCACC ACAGCAAACA
CCCATAGGAA ACGTATGGCT TTGGTGCACC GTCGCCCATA TCGCATCCTT GATCCTTCTG
GGCTTGTTGG CTCCACGGCT CTCGCCGTAT TGCAACAACG CAGTCGTCAC CGCAAGCTCC
CCGGCAATCA TGGCCGGAGG AACGGGGCTG CTGCTCGCAG GCATCACCGC GAATTCCACG
ATCTCGATCC TGCTCGCGCT CATCTTCGTA GGCATAGGGA CCGCCGGCAT GGTACTGTGC
TGGGGCGAGG TGCTTGCGGC ACTGAGCTTT AAAGGAGAGC AGCGTGCGCT GATACTCTCC
TGCATGATGG CGAGCATTCT CGTCTATCTG GCATTCTCCT TTCTGCCCAC CGAGGCTCTC
TATGGCTTCC TGTTCCTCAT GCCGGCCATC GCCGCTGTTC CTCTACAAAT GTGCATACGC
ACGCTCGACC TTCATCGGAG CATAGAAGAA GACCGTTCAG AACAACCCGA GAAGCTGACC
TCGAGATTTG TGTTGTTCTG CCTGATATAT TCAGTGCCGC TCGGATTCTT TCAAGTGAGG
TACACCGTGG ATGGCGGCCT GGGCGCTTGG GTTCCCGTGC TGGTTCCTTC GCTTTTGGTT
CTTGCCGCCA TTGGCATAGT CGACCATATC TTTGAACGAC AGCGAGGCTC CAACTTCCTG
CCAGCCATCG TCATACCCGG CGCCATTGCG GGCCTATTTA TGCTGGCAGC TTTCAACGAC
AACGATGCCC GACCTGCCGG TGTTCTCATT TTCTCAGCTC AGCAACTGCT CACGGTAATG
CTGTACGCGC GGTTCGCTTT CATGGCCAGT CGCAAGAAGA ACAACCCGGC GACCGTCTTC
GCACTGGGCG TTGGCGCAAC GGACGCGGGC TTTGTTCTAG GCATGCTCGC CGGAGAATCA
CCAACCGTAA GCGCATGGCC GCTGGATCTG ACCTTAGGTA TAGCTTATAT TGTCGTGCTC
GGAGGCTTTT TGGCAACCGG CGTTTTCCAG CGCAAAGACA TCGGCTCCGA AGATAATGCA
CAATTCGCTA CGGCTATCGA TTCGCGCAAC GACCTCAAAC GCGAACTGGA AGCAATATCC
GCAAAGTACG GTTTGACCGC CCGGGAAGAG GAAGTGCTCG GACAGCTGCT TCACGGAAAG
AGCGCTTCCG CGGTTGCCGC AGATCTGTTT CTGTCTAAGA ACACCGTGCG CTCCCACATC
GCACATCTTT ACCAGAAGAT GGACGTCCAC ACGCGCGACG AGCTGATCGA ACTTATCGAC
GCACAATAA
 
Protein sequence
MNGALDILKV RIWCAVGFTS YWAWLFLLLI AQVFGAPQQT PIGNVWLWCT VAHIASLILL 
GLLAPRLSPY CNNAVVTASS PAIMAGGTGL LLAGITANST ISILLALIFV GIGTAGMVLC
WGEVLAALSF KGEQRALILS CMMASILVYL AFSFLPTEAL YGFLFLMPAI AAVPLQMCIR
TLDLHRSIEE DRSEQPEKLT SRFVLFCLIY SVPLGFFQVR YTVDGGLGAW VPVLVPSLLV
LAAIGIVDHI FERQRGSNFL PAIVIPGAIA GLFMLAAFND NDARPAGVLI FSAQQLLTVM
LYARFAFMAS RKKNNPATVF ALGVGATDAG FVLGMLAGES PTVSAWPLDL TLGIAYIVVL
GGFLATGVFQ RKDIGSEDNA QFATAIDSRN DLKRELEAIS AKYGLTAREE EVLGQLLHGK
SASAVAADLF LSKNTVRSHI AHLYQKMDVH TRDELIELID AQ