Gene Elen_2890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_2890 
Symbol 
ID8417221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp3356073 
End bp3357473 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content63% 
IMG OID645025868 
ProductMATE efflux family protein 
Protein accessionYP_003183224 
Protein GI257792618 
COG category[V] Defense mechanisms 
COG ID[COG0534] Na+-driven multidrug efflux pump 
TIGRFAM ID[TIGR00797] putative efflux protein, MATE family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.831923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTACGG CGTCCATTCC GCGGCTTATC GTGGAATTCG CCATCCCTTC TATCCTGGGC 
ATGCTGGTCA ACGGTGCGTA CAACGTCATC GACTCCGTCT TCCTGGGGCA GGCCATGGGC
GAGATCGGCC TTGCCACCGC CACGGTGGCC ATGCCCATCA TGACGGTGTT CATGGCCATC
GCCATGCTCG TGGGCAACGG CGGTAATGCG CTGGCAGCGT TGCGCATGGG CGAGGGCAAC
CGGGTGGAGG CCGAGCGTAG CCTGGGCAAC ACGGTGTGCC TGTCTCTCGT GTTCGCGGTG
ATCGTGGCCG TGCTCATGCA TATTCCCGCC TGCGTCAATG CGCTGCTCGG CGTGTCGGGC
GCCACGGCGG AGGATTGGGA GTACGCTCGC TCGTTCATCC AGATCATCTC GCTGGGCTTC
GTGTTCCAGT GCATCGGCAT GGGCGTGAAC AACTTCATCC GTACGGCCGG CGCACCGAAC
CGCGCGCTGG GCACCATGAT CATCGGCGCG GTATCGTGCA CGGTGTTCAA CTTCCTGTTC
GTCATGGTGC TGGGCTGGGG CGTGCAGGGC AGCGCGCTGG CCACGGTGTG CGGCCAGGCC
ATCTCGTGCG CCACGGTGCT GTGGTACTTC ATCGTTACGA AGAACGTTCC TATGAAGCTG
CATCTGCACT ACTTGCCGCT GCATCTGCGC ACGGTGCGGC TGATTCTGTC GCTGGGTCTG
GCCAGCTTCG CCGTACAGGC GGGCATGGCC GTGGTGAACT TCGTGCTGAA CAATCTGCTG
AACATGTACG GCGCCATGAG CCCGCTGGGA GCCGAGGGGG CGCTCGCGTC TATCGGCGTG
GTGCAGCGCG TGGCCATGTT CGCGGTGCTG CCGCTGATCG GCGTGTCCAT CGCCATCCAA
CCGCTGCTGG GCTTCAACTA CGGCGCGCAC CTGTTCGAAC GCGTGAAGAA GACGCTATGG
TACGGCATCT TCGGGGCGAC GGGCATCGGT TTGGCGCTGT GGGCGCTCGT GCACCTGTTC
CCCGAGCAGA TCGTCGGGTT CTTCGGCATC ACGAACGAAT CACTGCGCGA CTTCACGGTG
TTCGCCCTCA AGGTGCAGCT GCTCATGCTG CCCTTCATCG GCTTCCAGAT CGTGGGCTCG
AATTACTTCC AGGCAACCGG GCAGCCGCTC AAGTCCATCT TCTTGTCGCT GACGCGCCAG
ATACTGTTCC TGGTGCCGCT GCTCATCGTG CTGCCGATGG TGCTGCCCAG CTGGTTCCCG
CAGTTCGTCA GCCTCGACGC GCTGTACTTC GCCACCCCCG CGGCCGACTT CCTGGCCATC
TTCACCACGG TGGTGTTCAT CGTCTTAGAG ATGGGACGCT TGAAGAAGCT CGAGAGCGGA
GAACTGAAAG CGAAGTTCTA A
 
Protein sequence
MGTASIPRLI VEFAIPSILG MLVNGAYNVI DSVFLGQAMG EIGLATATVA MPIMTVFMAI 
AMLVGNGGNA LAALRMGEGN RVEAERSLGN TVCLSLVFAV IVAVLMHIPA CVNALLGVSG
ATAEDWEYAR SFIQIISLGF VFQCIGMGVN NFIRTAGAPN RALGTMIIGA VSCTVFNFLF
VMVLGWGVQG SALATVCGQA ISCATVLWYF IVTKNVPMKL HLHYLPLHLR TVRLILSLGL
ASFAVQAGMA VVNFVLNNLL NMYGAMSPLG AEGALASIGV VQRVAMFAVL PLIGVSIAIQ
PLLGFNYGAH LFERVKKTLW YGIFGATGIG LALWALVHLF PEQIVGFFGI TNESLRDFTV
FALKVQLLML PFIGFQIVGS NYFQATGQPL KSIFLSLTRQ ILFLVPLLIV LPMVLPSWFP
QFVSLDALYF ATPAADFLAI FTTVVFIVLE MGRLKKLESG ELKAKF