Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_2890 |
Symbol | |
ID | 8417221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | - |
Start bp | 3356073 |
End bp | 3357473 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645025868 |
Product | MATE efflux family protein |
Protein accession | YP_003183224 |
Protein GI | 257792618 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.831923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTACGG CGTCCATTCC GCGGCTTATC GTGGAATTCG CCATCCCTTC TATCCTGGGC ATGCTGGTCA ACGGTGCGTA CAACGTCATC GACTCCGTCT TCCTGGGGCA GGCCATGGGC GAGATCGGCC TTGCCACCGC CACGGTGGCC ATGCCCATCA TGACGGTGTT CATGGCCATC GCCATGCTCG TGGGCAACGG CGGTAATGCG CTGGCAGCGT TGCGCATGGG CGAGGGCAAC CGGGTGGAGG CCGAGCGTAG CCTGGGCAAC ACGGTGTGCC TGTCTCTCGT GTTCGCGGTG ATCGTGGCCG TGCTCATGCA TATTCCCGCC TGCGTCAATG CGCTGCTCGG CGTGTCGGGC GCCACGGCGG AGGATTGGGA GTACGCTCGC TCGTTCATCC AGATCATCTC GCTGGGCTTC GTGTTCCAGT GCATCGGCAT GGGCGTGAAC AACTTCATCC GTACGGCCGG CGCACCGAAC CGCGCGCTGG GCACCATGAT CATCGGCGCG GTATCGTGCA CGGTGTTCAA CTTCCTGTTC GTCATGGTGC TGGGCTGGGG CGTGCAGGGC AGCGCGCTGG CCACGGTGTG CGGCCAGGCC ATCTCGTGCG CCACGGTGCT GTGGTACTTC ATCGTTACGA AGAACGTTCC TATGAAGCTG CATCTGCACT ACTTGCCGCT GCATCTGCGC ACGGTGCGGC TGATTCTGTC GCTGGGTCTG GCCAGCTTCG CCGTACAGGC GGGCATGGCC GTGGTGAACT TCGTGCTGAA CAATCTGCTG AACATGTACG GCGCCATGAG CCCGCTGGGA GCCGAGGGGG CGCTCGCGTC TATCGGCGTG GTGCAGCGCG TGGCCATGTT CGCGGTGCTG CCGCTGATCG GCGTGTCCAT CGCCATCCAA CCGCTGCTGG GCTTCAACTA CGGCGCGCAC CTGTTCGAAC GCGTGAAGAA GACGCTATGG TACGGCATCT TCGGGGCGAC GGGCATCGGT TTGGCGCTGT GGGCGCTCGT GCACCTGTTC CCCGAGCAGA TCGTCGGGTT CTTCGGCATC ACGAACGAAT CACTGCGCGA CTTCACGGTG TTCGCCCTCA AGGTGCAGCT GCTCATGCTG CCCTTCATCG GCTTCCAGAT CGTGGGCTCG AATTACTTCC AGGCAACCGG GCAGCCGCTC AAGTCCATCT TCTTGTCGCT GACGCGCCAG ATACTGTTCC TGGTGCCGCT GCTCATCGTG CTGCCGATGG TGCTGCCCAG CTGGTTCCCG CAGTTCGTCA GCCTCGACGC GCTGTACTTC GCCACCCCCG CGGCCGACTT CCTGGCCATC TTCACCACGG TGGTGTTCAT CGTCTTAGAG ATGGGACGCT TGAAGAAGCT CGAGAGCGGA GAACTGAAAG CGAAGTTCTA A
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Protein sequence | MGTASIPRLI VEFAIPSILG MLVNGAYNVI DSVFLGQAMG EIGLATATVA MPIMTVFMAI AMLVGNGGNA LAALRMGEGN RVEAERSLGN TVCLSLVFAV IVAVLMHIPA CVNALLGVSG ATAEDWEYAR SFIQIISLGF VFQCIGMGVN NFIRTAGAPN RALGTMIIGA VSCTVFNFLF VMVLGWGVQG SALATVCGQA ISCATVLWYF IVTKNVPMKL HLHYLPLHLR TVRLILSLGL ASFAVQAGMA VVNFVLNNLL NMYGAMSPLG AEGALASIGV VQRVAMFAVL PLIGVSIAIQ PLLGFNYGAH LFERVKKTLW YGIFGATGIG LALWALVHLF PEQIVGFFGI TNESLRDFTV FALKVQLLML PFIGFQIVGS NYFQATGQPL KSIFLSLTRQ ILFLVPLLIV LPMVLPSWFP QFVSLDALYF ATPAADFLAI FTTVVFIVLE MGRLKKLESG ELKAKF
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