Gene Elen_2721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_2721 
Symbol 
ID8417047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp3151086 
End bp3154454 
Gene Length3369 bp 
Protein Length1122 aa 
Translation table11 
GC content70% 
IMG OID645025697 
Productsingle-stranded-DNA-specific exonuclease RecJ 
Protein accessionYP_003183058 
Protein GI257792452 
COG category[L] Replication, recombination and repair 
COG ID[COG0514] Superfamily II DNA helicase
[COG0608] Single-stranded DNA-specific exonuclease 
TIGRFAM ID[TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR00644] single-stranded-DNA-specific exonuclease RecJ 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCCC AGTTCAAGAT CAAAGCGGCC GACCCCGCGT CCGTCGTGCG CCTGGAGCGC 
GAACTCGGTC TGCCCCGCTT CATCGCAGCG ACGCTGGTCG CCCGCGGCAT CGACAACCCC
GCTGCGGTTC ACCGTTTCCT CGCGCCGTCG CTCGAGCGCG ACTGGCTGGA CCCCTACATC
ATCCCCGGCC TGTCCGACGT GGCCGATGCC CTGGAAGCCG CCGTCAAGCG CGGCGACCAC
ATCCTCGTGT TCGGCGACTT CGATCTCGAC GGCATCTCGG CCACCACCGT GCTCACCCGC
GGTTTGCGCG CCCTCGGCGC GCAGGCCACG CCGTTCATCC CGCTGCGCTT CGAAGAGGGC
TACGCGCTGT CGCAGGCCGC CATCACGCGC GCGTGCTCGT TCGGCCCCGA CTTCATCGTC
ACGGTGGACT GCGGCATCGC CTGCAAGGCG GAGGCCGCGG CCGTGGTGGA GGCGGGTCTG
GGCCTGGCTA TCACCGACCA CCACGAGCCG GTGGACCTTG TGCCTGAAGG CGTGCCCGTG
GCCGATCCGA AGTGCGACGC GAACTGCCCC AGCTCCATCC TGGCGGGCGT GGGCGTGGCC
CTGAAGCTGG TGCAGGTGCT GGGCGGCCGT CTGGGCCAGC CGCACCTATG GCGCGACTTC
ACCGACTTCG CCACGCTGGG CACGGTGGCC GACCTCATGC CCATGCGCGA CGAGAACCGC
GCCCTCGTGT CCGACGGCAT CGCGCGCATG AACGCCGCGC CGCGCCCGTG CATCGCCGCG
CTGCTGGCCA CCAGCGGCGC GGCCGACAAG CCCGTCAGCG CCACGAACCT CAGCTTCTCC
GTCATCCCGC GCCTCAACGC CGCCGGCCGC ATGGGCGACG CGCAGCTGGC GCTCGACCTG
CTGATGACCG ACGACTTCGA GGAGGCGAAC CGCCTGGCCA CGAAGCTGGA ATCGGTGAAC
GATCAGCGCC GCGCCATCGA AGCCGAGCTG TCCGAGATCG CGAAGGCGCA GGCCGCCGAG
ATCTACCACG GCCAGCGCGC GCTGGTGGTG TCGGGCGAGA GCTGGCACGA GGGCGTGAAG
GGCATCGTGG CAAGCCGCCT GGTGAACACG TACGGCGTGC CCAGCCTGCT GTTCACCATC
GACGGCGACG AAGCGCGCGG CAGCGGCCGC AGCGTGGGCC AGGTCAGCCT GTTCTCGGCT
GTGGAAAGCG CATCCGACCT GCTCACGCGC TTCGGCGGGC ACGATGCGGC CGTGGGCGTC
ACGCTGCCGG CCGACAAGCT GCCGGAGTTC GAGCGGCGCC TGTGCGCCTA CATGGACGCG
CTGCCCGAGG GCGCGTTCCA TCCGCTCGTG GAAATCGACT CGTGCGTCAG CCTCGATGAG
CTGACGCTGG ACAACGTGGC GCAACTGGAC AAGCTGGCGC CGTTCGGCCA GGAGCATCCC
GTGCCCGTGT ACCTGGCGCG CGACGTGATG CTGGCGAACT GCCGCGCGGT GGGCGCCGAG
AAGAACCACT TCTCGTGCTC GCTGTCCGAC GGGCGCGCCA CGGTGTCGGG CATCATGTTC
CACTGCTCGG ACATCGAATC GCTCATGCGC ACCGACAGCG TGGTGAACGC CGCGTTCGAG
GTGCAGATCG ACGAATGGCG CGGCCGCAAG TCGGTGAAGG CCATGCTGCA GTCGCTGGCT
CCCGCGCGCA CCTGCGGCGC CCTGGAGGCC TGCCTCAACC CCGAGAACCT CAGCTTCGTG
GCCGACCTGT ACGCCACGAG CGACGCCGAG CTGTGCGCGA ACGCGCCGCA TCGCCCCGAG
GACGTGGAGG CCTACGAGGC GGCCCGCGCG GCGAACCGCG CCTGCTGGGA GCGCAAGGCC
GCGGAAGACC CCGCGGCGCT CGAGCAGGCC GTCGTGCGCG CCATCATCGG CGACAAGCCG
CTGCACGACG CGCAGCGCGA GATCCTCGCG CATCTGCGCG CCGGGCGCTC CACGCTGGGC
ATCATGGCCA CGGGGCGCGG CAAATCGCTG ACCTTCCAGG TGCACGCCGC CGAGCGCGCG
CTGGCGAACC ACGAGGCCAG CCTGTTCGTG TACCCGCTGC GCGCGCTGAT CGCCGATCAG
GCGTTCCACC TGCGCGAGGC GCTGGACGCG TTCGGTATCG GCGTGATCAC GCTGACGGGC
GAGAGCACGC CCGACGAGCG CCGCCAGGGC TTCGCGGGCC TGGCCGACGG CACCTACGAC
ATCGTGCTGA CCACGCCCGA GTTCCTTGCG TGGCACGCTG ACGAGTTCGC GGCCGCGGGC
CGCGTGCGCT TCGTCGTGGT GGACGAGGCG CACCATATCG GCCTGGCGAA GGCGGGCCAG
CGCGTGGCCT ACGCCACCAT CGGCGCCGCC ATTGCGAAGC TGGCTGGGCC CGGCGGCGAG
GCTCCCGCGG TGCTGGCGCT TACGGCCACG GCCGACGACG AGGTGGCGGC CGCCATCAAG
CGCGAGCTGC CGGTGGACGC CTGCGTGTAC GACCCGGCTT CGCGTCCCAA CCTCGAGGTG
GACGACCAGC GCAACCTCAA GAACCGCGAC GACTACCTGG CGAATCTCAT CGCGTCGGGC
GGCAAGACGG TCATCTACGT GAACTCGCGC GAGCAGTCGG TTGCCGTGGC GCGCGCTCTG
CGCAAGCGGG TGCCCCAGCT GGCGCCGCTC ATCGGCTTCT ACAACGCGGG CCTCGCACGC
GCCGAGCGCA AGCGCATCGA AGAGCTGTTC CGCACCGACG CGCTGTCGGT GCTGGTGGCC
ACGTCCGCTT TCGGCGAGGG CGTGGACATC CCCAACATCC GCCACGTGGT GCTGTACCAC
CTGCCGTTCA ACGAGATCGA GTTCAACCAG ATGAGCGGCC GGGCGGGCCG CGACGGCAAG
CCCGCGGGCA TCCACCTACT GTTCAACCGC GGCGACTGCT CGCTCAACGA GCGCATCCTG
CGCGACATGA CGCCCGACCA CGACTGCCTG GCCCAGGTGT ACCGCCGCCT GCGCAGTCTG
CAGCGAGAGA TGGGCGAGTG CTTCTTCACC ATGGGCAACG CCGATCTGGC CGCGGCGGCC
AGCACCGATG CATTCCCTAT CAGCCCCGCC TCGGCAGCGT GCGGCGTGGC GGTGTTTCGC
GAGCTCGGGC TTATCGAGAC GCACACCGCG TTCGGCGCCG ACGGCATGGC GCGCTCCATC
CACGTGGTGG AGACGCAGGA CAAGGTGGAG TTGACGGACA GCGTACGCTA CCGTGAAGGT
TTGGGGGAGC GCGAGGTGTT CCACGCGTTC CGGGACTGGG CGATGAAGAG CGATTCTGCT
ACCCTCCATA TACGCGTGTC GCGGCCCATT TTGCCGGGTG ACGCGGCAGG CGACGCGCGC
GAGCGCTAG
 
Protein sequence
MSAQFKIKAA DPASVVRLER ELGLPRFIAA TLVARGIDNP AAVHRFLAPS LERDWLDPYI 
IPGLSDVADA LEAAVKRGDH ILVFGDFDLD GISATTVLTR GLRALGAQAT PFIPLRFEEG
YALSQAAITR ACSFGPDFIV TVDCGIACKA EAAAVVEAGL GLAITDHHEP VDLVPEGVPV
ADPKCDANCP SSILAGVGVA LKLVQVLGGR LGQPHLWRDF TDFATLGTVA DLMPMRDENR
ALVSDGIARM NAAPRPCIAA LLATSGAADK PVSATNLSFS VIPRLNAAGR MGDAQLALDL
LMTDDFEEAN RLATKLESVN DQRRAIEAEL SEIAKAQAAE IYHGQRALVV SGESWHEGVK
GIVASRLVNT YGVPSLLFTI DGDEARGSGR SVGQVSLFSA VESASDLLTR FGGHDAAVGV
TLPADKLPEF ERRLCAYMDA LPEGAFHPLV EIDSCVSLDE LTLDNVAQLD KLAPFGQEHP
VPVYLARDVM LANCRAVGAE KNHFSCSLSD GRATVSGIMF HCSDIESLMR TDSVVNAAFE
VQIDEWRGRK SVKAMLQSLA PARTCGALEA CLNPENLSFV ADLYATSDAE LCANAPHRPE
DVEAYEAARA ANRACWERKA AEDPAALEQA VVRAIIGDKP LHDAQREILA HLRAGRSTLG
IMATGRGKSL TFQVHAAERA LANHEASLFV YPLRALIADQ AFHLREALDA FGIGVITLTG
ESTPDERRQG FAGLADGTYD IVLTTPEFLA WHADEFAAAG RVRFVVVDEA HHIGLAKAGQ
RVAYATIGAA IAKLAGPGGE APAVLALTAT ADDEVAAAIK RELPVDACVY DPASRPNLEV
DDQRNLKNRD DYLANLIASG GKTVIYVNSR EQSVAVARAL RKRVPQLAPL IGFYNAGLAR
AERKRIEELF RTDALSVLVA TSAFGEGVDI PNIRHVVLYH LPFNEIEFNQ MSGRAGRDGK
PAGIHLLFNR GDCSLNERIL RDMTPDHDCL AQVYRRLRSL QREMGECFFT MGNADLAAAA
STDAFPISPA SAACGVAVFR ELGLIETHTA FGADGMARSI HVVETQDKVE LTDSVRYREG
LGEREVFHAF RDWAMKSDSA TLHIRVSRPI LPGDAAGDAR ER