| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_2601 |
|---|
| Symbol | |
|---|
| ID | 8416926 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 3036680 |
|---|
| End bp | 3037735 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645025580 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003182942 |
|---|
| Protein GI | 257792336 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000831419 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.000000147354 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGCCTAGGG CGAAAGCGGC CGATACGGTC GAGGTCGTCG AGGTGGAAGC CGAGATCATC
GACGGCGCAG AAGATCAGCA GAAGGCGGAG CTGTCCGTCA CCAACAAGCC CGGGAGCATC
GAGGCGAACT TCGACGCGTT GGAGGAATAC GTCGATGGCA TCCTCGAAGA TTACGCGGAC
TGGGAGCCGT CGGCGGACAA CGCCGAGGAC GTGAAGCAGT GCGACCGCGA GAAGAAGTAC
CTCAACGGCC TCGCCTCCCA GCTCGACACG CGGCGCAAGG CCGTCAAGTC GGAATACCTC
AAGCCCCTCG ACGCCTTCGA GGCGCGCGCC AACTCGATCC GCGACAAGAT CAAGGCGACG
GCCAAGCGCC TCGACGACGT GAAGAAGCAG GCGGATCAGG CGGAGAAGGA CGCCAAGTAT
TCCGCGCTCG AAGCCCATTA CTGCGAGTTC GCCGAACTGC TCGCGCCCGT GGTGCCTTAC
GCGAGGCTCC ATGATCCCAA GTGGCTCAAC AAGCGCCCCA CCCTGCCGCA GGCCATCAAG
GAGCTTGACG CGAAGGTGGA AAAGGTCGCG AACGACTGGG ACAGCCTCAA GAAGCGCAAC
CTCGAATTCC ACGATGCTGC AGAGGCGTTC TTCTTCGAGC ACTTGGACCT CGGCGCAGCC
TGCACGTATA ACGACAAGCT CGTGGAGGAC CACAGGCGCA TCGAAGAGCT TAAGCGCGAG
ATGGCGCAGG AGGAAGAGGC ACAGGAGGCC GCGCCAGCGC AAGAGCGACC GGAGCCGGCA
CCTGCGCCGA TGCCCGCGCC GGTGCCCGTG AGCGCGCCGC AGCCCGCCCC CGCGCCCGTC
GTCGCGTGCG CGCCGCAGCC CATGCCCGCG CCTATGCCGG AGCCGGTCCC GCCCGACGCA
GGCCCTTACG TCATGGTCAT CAACTTGGCG ACGCTCGACC AGATTCAGCA GATCGGCCGG
TTCTCCGGGA GCATCGGGGT TACCGGCGTT TTCAAACGCG GCACGCTGCA AGAGGCGTAT
ATGCGCGAGG CGGGGGGTGT CGGATATGAC CGGTAG
|
|---|
| Protein sequence | MPRAKAADTV EVVEVEAEII DGAEDQQKAE LSVTNKPGSI EANFDALEEY VDGILEDYAD
WEPSADNAED VKQCDREKKY LNGLASQLDT RRKAVKSEYL KPLDAFEARA NSIRDKIKAT
AKRLDDVKKQ ADQAEKDAKY SALEAHYCEF AELLAPVVPY ARLHDPKWLN KRPTLPQAIK
ELDAKVEKVA NDWDSLKKRN LEFHDAAEAF FFEHLDLGAA CTYNDKLVED HRRIEELKRE
MAQEEEAQEA APAQERPEPA PAPMPAPVPV SAPQPAPAPV VACAPQPMPA PMPEPVPPDA
GPYVMVINLA TLDQIQQIGR FSGSIGVTGV FKRGTLQEAY MREAGGVGYD R
|
|---|
| |