Gene Elen_2563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_2563 
Symbol 
ID8416888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp2997789 
End bp2998481 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content65% 
IMG OID645025543 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003182905 
Protein GI257792299 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTACT ACGTTGAAGA CGATACCAAC ATCCGCGACC TCACGGTGTA CGCTCTCAAG 
CAGGCCGGAT TCGAGGCGGC GGGCTTCCCG GCGGCGGGCG AGTTCTTCGC CGCGTGCAAG
GAGCGCCTCC CCGAGTTGGT GCTGCTCGAC ATCATGCTGC CGGAAATCGA CGGGCTCGAG
ATCCTCCATA TGCTGCGCGA GAACCCGGCG ACCAAGCATC TGCCCGTGAT GATGCTCACG
GCCAAGGGCA CCGAGTTCGA CACGGTGAGC GGCCTCGATG CCGGCGCTGA CGACTATCTG
GCCAAGCCTT TCGGCATGAT GGAGCTGGTC AGCCGCGTGA ACGCGCTCAT GCGCCGCGCG
TCGGCGCCTC CCGTCATGGC CGACGACGAG CTGTCTTGCG GTCCTATCGA GCTATGCGTG
TCGGCTCACA CCGTGCAGGT GGGCGGCGAG CCCATCACGC TCACGCTCAA GGAGTTCGAC
CTGCTGCACA CGCTGCTGCA GAACCAGGGG CACGTGCTGT CGCGCAGCCA ACTGCTGGAA
GACGTGTGGG GTATGACGTA CGTGGGGGAG ACGCGCACGG TGGATGTGCA CGTGCAGACG
CTGCGCCAGA AGCTGGCCGC GGCGCAAGAA GGGGCCGACG CCCTCGTTCG TACGGTGCGC
GGCGTGGGCT ACTGCATCAA ACCCTCCTCG TGA
 
Protein sequence
MIYYVEDDTN IRDLTVYALK QAGFEAAGFP AAGEFFAACK ERLPELVLLD IMLPEIDGLE 
ILHMLRENPA TKHLPVMMLT AKGTEFDTVS GLDAGADDYL AKPFGMMELV SRVNALMRRA
SAPPVMADDE LSCGPIELCV SAHTVQVGGE PITLTLKEFD LLHTLLQNQG HVLSRSQLLE
DVWGMTYVGE TRTVDVHVQT LRQKLAAAQE GADALVRTVR GVGYCIKPSS