Gene Elen_2549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_2549 
Symbol 
ID8416873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp2981232 
End bp2981801 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content69% 
IMG OID645025530 
ProductShikimate kinase 
Protein accessionYP_003182893 
Protein GI257792287 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCACG AGGCTTCGAG ACGACCTCGC GTGGTGGGGG AGCTTGCGCG CCCCGTGTTC 
TTCGTGGGAT TCATGGGCGC GGGGAAGACG TCGGTCGCGC GACGGCTGGC GCGCACCTGC
GGCGTGGCCT CGGTGGACAT GGACACGTAC CTCGAGCGCC GCGAGGGCAA GCGCGTGAAG
GAGATCTTCG CGCAGGCGGG CGAGGACGGC TTCCGCGCCA TCGAGACGGA CGTGCTGCGC
GAGCTGGCCG GCAAGGAGCC GCTGCTCGTG TCGTGCGGCG GCGGCGTGGT GAAGCGCGAT
GAGAACCGCG CCATCCTGCG CGATGCGGGG TTCGTCGTGT ACCTGAAGGT CACGGCCGAC
GAGGCGAAGT CGCGCATCAG CGACACCTCC ACGCGCCCTT TGTTCCAGGA CCTCGATGTC
GCGCGCAAGA CGTCCGAGGA GCGCCTGCCC CTGTACGCCG AGGTGGCCGA CCTCACCATC
GACACCGCCG GCAAGAACGT GGCTACCATC GCGCGCGAAG TGCAGAGCGC GCTCGAGAAG
GAGGGCATCC TGTGCCTGCA ACGAAAGTGA
 
Protein sequence
MRHEASRRPR VVGELARPVF FVGFMGAGKT SVARRLARTC GVASVDMDTY LERREGKRVK 
EIFAQAGEDG FRAIETDVLR ELAGKEPLLV SCGGGVVKRD ENRAILRDAG FVVYLKVTAD
EAKSRISDTS TRPLFQDLDV ARKTSEERLP LYAEVADLTI DTAGKNVATI AREVQSALEK
EGILCLQRK