Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_2549 |
Symbol | |
ID | 8416873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | - |
Start bp | 2981232 |
End bp | 2981801 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645025530 |
Product | Shikimate kinase |
Protein accession | YP_003182893 |
Protein GI | 257792287 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCACG AGGCTTCGAG ACGACCTCGC GTGGTGGGGG AGCTTGCGCG CCCCGTGTTC TTCGTGGGAT TCATGGGCGC GGGGAAGACG TCGGTCGCGC GACGGCTGGC GCGCACCTGC GGCGTGGCCT CGGTGGACAT GGACACGTAC CTCGAGCGCC GCGAGGGCAA GCGCGTGAAG GAGATCTTCG CGCAGGCGGG CGAGGACGGC TTCCGCGCCA TCGAGACGGA CGTGCTGCGC GAGCTGGCCG GCAAGGAGCC GCTGCTCGTG TCGTGCGGCG GCGGCGTGGT GAAGCGCGAT GAGAACCGCG CCATCCTGCG CGATGCGGGG TTCGTCGTGT ACCTGAAGGT CACGGCCGAC GAGGCGAAGT CGCGCATCAG CGACACCTCC ACGCGCCCTT TGTTCCAGGA CCTCGATGTC GCGCGCAAGA CGTCCGAGGA GCGCCTGCCC CTGTACGCCG AGGTGGCCGA CCTCACCATC GACACCGCCG GCAAGAACGT GGCTACCATC GCGCGCGAAG TGCAGAGCGC GCTCGAGAAG GAGGGCATCC TGTGCCTGCA ACGAAAGTGA
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Protein sequence | MRHEASRRPR VVGELARPVF FVGFMGAGKT SVARRLARTC GVASVDMDTY LERREGKRVK EIFAQAGEDG FRAIETDVLR ELAGKEPLLV SCGGGVVKRD ENRAILRDAG FVVYLKVTAD EAKSRISDTS TRPLFQDLDV ARKTSEERLP LYAEVADLTI DTAGKNVATI AREVQSALEK EGILCLQRK
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