Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_2516 |
Symbol | |
ID | 8416840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | - |
Start bp | 2943674 |
End bp | 2945824 |
Gene Length | 2151 bp |
Protein Length | 716 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645025497 |
Product | excinuclease ABC, B subunit |
Protein accession | YP_003182860 |
Protein GI | 257792254 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCATC TTTCCAATAT CGAAGGCATC GAGATGGAGG GCAAGCTGCC CGAGGTTCGT CTTGCCTCCA CGCCGTTCAA AGCGGTGTCT CCGTACGAGC CGGCGGGCGA TCAGCCGCAG GCCATCGAGA AGCTGGCGAC CGGCGTCAAG GAGGGCTTGC GCTATCAGAA CCTGCTGGGC GTCACCGGTT CCGGCAAGAC GTTCACCATG GCAAAGGTCA TCGAGGCCGT GCAGAAGCCC ACGCTGGTCA TGGCTCCGAA CAAGACGCTG GCGGCGCAGC TGGCCAGCGA GCTGAAGGAG TTCTTTCCCG ACAACGCCGT GGTGTACTTC GTGTCGTACT ACGATTACTA CCAGCCCGAG GCGTACGTGC CCTCGTCGGA CACGTTCATC GAGAAGGACG CGTCCATCAA CGAAGAGGTG GAGAAGCTGC GCCATGCGGC CACGTCGGCT TTGCTGTCGC GGCGCGACTG CATCGTGGTG GCGTCGGTGT CGTGCATCTA CGGCATTGGC AGCCCGATGG ACTACGCCGG CATGGCCGTG TTCGTGGACA AGCAGAAGGA CATGGATCGC GACCAGGTCA TCCATGAGCT CATCGATATC CAGTACGACC GCAACGACTA CGAGCAGAAG CGCGGCACGT TCCGCGTGCG CGGCGATGCG CTCGATGTGT TCCCGCCTTA CGCCGACCAT CCGATCCGCA TCGAGTTCTG GGGCGACGAG ATCGAGTCCA TCACCGAGAT CGACAACGTG ACGGGCGAAG TGCTGAGCGA GTTCGAGGCT CTGCCTATCT GGCCGGCCTC CCACTACGTG ACCGCGCGTC CGAAGATGGA TCGCGCGCTG GGCACCATCC GCGACGAACT GCGCGAGCGC TTGCAGCAGT TCAAGGAGGA AGGCAAGCTG CTGGAGGCGC AGCGCCTCGA GATGCGCGTG AACTACGACC TCGAGATGCT GGAGACGATG AACTTCTGCT CGGGCATCGA GAATTACTCG CGCCACATGG ACGGACGCGA GCCGGGAGAG CCGCCCTACA CGCTGATCGA CTATTTCCCG AAAGACTTCT TCTGCATCAT CGACGAGAGC CACGTGACGG TTCCGCAGAT CCGCGGCATG CACGAGGGCG ATCGCTCGCG CAAGATCACA TTGGCCGAGC ACGGCTTCCG TCTGCCCAGC TGCCTGGACA ACCGTCCGCT GCGCTTCGAC GAGTTCGAGG ATCGCATCCC GCAGTTCGTG TACGTGTCGG CCACGCCGGG CGACTACGAG CAGAAGGTGT CGCAGCAGCA GGTGGAGCAG ATTATCCGCC CCACCGGCCT GCTGGATCCC GAGATCATCG TGCGCGGCTC GGCATCGCAG ATCGACGACA TCATCGACGA GTCGAAGGAG CGCGCTGCGC GCGATGAGCG CGTGCTCATC ACCACGCTGA CGAAGAAGAT GGCCGAGGAC TTGACGGATC ACCTGCTGGA CCAGGGAGTG AAGGCTCGCT ACATGCACTC CGACATCGCC ACGCTCGAGC GCGTCGAGAT CCTGCGCGAT CTGCGCCGCG GCGAGTTCGA CGTGCTGGTG GGCATCAACC TTTTGCGCGA GGGCCTGGAC CTGCCGGAGG TATCGCTCGT TGCCATCTTG GATGCCGACA AGGAAGGTTT CCTGCGCAAC CACCGCTCGC TCATCCAGAC CATCGGGCGT GCGGCGCGAA ACGTTTCGGG TCAAGTGATC ATGTACGCCG ACAAGATGAC GGATTCCATG GCGCTGGCCA TCGATGAGAC GAAGCGCCGC CGCGCCATCC AGATGAAGTA TAACGAGGAG CACGGCATCG AGCCGCAGAC CATCCGTAAG GCCATCAACG ACATCATGAG CTACGTCACC GACGAGATGG GCGGCACCAC GGCCGAGCAG GTGAACAAGG AGCTTGCCGA GCTGTCGCGC GAAGAGGTGC TGCGCATCAT CCAGTCGATG GAGGACGACA TGGCCTCCGC GTCCCAAAGC ATGGACTTCG AGGAAGCCGC CCGCCTGCGC GACCAGGTGG TCAAGCTGCG CGTCCAGGTG GAGGGCGGCA GCGAGGACGA CGTGTTGAAG GACCTCAAGA AGAACGCCCG CAAAGGTAGC GCGTACGGCA ATCGAAAGAA CGCCGCATAC GGCAGCGCCC GAAGGTCGTG A
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Protein sequence | MAHLSNIEGI EMEGKLPEVR LASTPFKAVS PYEPAGDQPQ AIEKLATGVK EGLRYQNLLG VTGSGKTFTM AKVIEAVQKP TLVMAPNKTL AAQLASELKE FFPDNAVVYF VSYYDYYQPE AYVPSSDTFI EKDASINEEV EKLRHAATSA LLSRRDCIVV ASVSCIYGIG SPMDYAGMAV FVDKQKDMDR DQVIHELIDI QYDRNDYEQK RGTFRVRGDA LDVFPPYADH PIRIEFWGDE IESITEIDNV TGEVLSEFEA LPIWPASHYV TARPKMDRAL GTIRDELRER LQQFKEEGKL LEAQRLEMRV NYDLEMLETM NFCSGIENYS RHMDGREPGE PPYTLIDYFP KDFFCIIDES HVTVPQIRGM HEGDRSRKIT LAEHGFRLPS CLDNRPLRFD EFEDRIPQFV YVSATPGDYE QKVSQQQVEQ IIRPTGLLDP EIIVRGSASQ IDDIIDESKE RAARDERVLI TTLTKKMAED LTDHLLDQGV KARYMHSDIA TLERVEILRD LRRGEFDVLV GINLLREGLD LPEVSLVAIL DADKEGFLRN HRSLIQTIGR AARNVSGQVI MYADKMTDSM ALAIDETKRR RAIQMKYNEE HGIEPQTIRK AINDIMSYVT DEMGGTTAEQ VNKELAELSR EEVLRIIQSM EDDMASASQS MDFEEAARLR DQVVKLRVQV EGGSEDDVLK DLKKNARKGS AYGNRKNAAY GSARRS
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