Gene Elen_2378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_2378 
Symbol 
ID8416702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand+ 
Start bp2796445 
End bp2797119 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content65% 
IMG OID645025362 
Productprotein of unknown function DUF161 
Protein accessionYP_003182725 
Protein GI257792119 
COG category[S] Function unknown 
COG ID[COG2364] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.793983 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.5891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAAT GGATGGACCT GCGCCACACC TACAACCTCA AAGGCAAGCT GCTGTTCTCG 
TGCCTCGGCA TCGTGTGCAT CGCGCTGGGC ACCACGGTGT GCCGCGTGGG AAACGTGGGC 
GTCGACCCGT TCACCGCTAT GAACCTGGGG TTCAGCGCGC GCGTGGGCAT GGACTTCGGC 
ACGTTCCAGC TGCTAGTGAA CCTGGCGATC TTGGCAGCGG TGTTCGCGCT GGACAAGTAC 
CAGATAGGCC TGGGCACGCT CATCAACATG GTGGGCGTAG GCTACCTCAT CGAGCTGTTC 
ACGTGGCTGC TCGGCTTTCT GCCGAAGTTC GAAGGCCTGG TCAGCGCAGG CGTTCATCTG 
GCCATCGGCA CGCTGCTGTT CACGCTGGGC GTGTCGCTGT ACCTGAAGAC GCGCATGGGC 
GTGGCGCCCA TCGACGCCGT CGCGCCCATC GCCGCCGAAC GCCTGCCCTT CTCGTACACG 
GCGTGCCGCA TGACGCAGGA CATCTCCGTG ACCGTCCTGG CGGTGCTGGC GGGCGGACCC 
ATCGGCGTGT TCACCGTGAT CGCCGCGTTC TTCACCGGAC CGTTGATCAC GGCGTGGAAT 
CGGTTCGCCA CGCTGCCGCT GTACCGCCGC TTCGGAATTC TGAACCGCGA GGAGCTGGCG 
GAGGAGCGCT CATGA
 
Protein sequence
MAKWMDLRHT YNLKGKLLFS CLGIVCIALG TTVCRVGNVG VDPFTAMNLG FSARVGMDFG 
TFQLLVNLAI LAAVFALDKY QIGLGTLINM VGVGYLIELF TWLLGFLPKF EGLVSAGVHL 
AIGTLLFTLG VSLYLKTRMG VAPIDAVAPI AAERLPFSYT ACRMTQDISV TVLAVLAGGP 
IGVFTVIAAF FTGPLITAWN RFATLPLYRR FGILNREELA EERS