Gene Elen_2020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_2020 
Symbol 
ID8416331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp2367168 
End bp2367665 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content67% 
IMG OID645024997 
ProductUspA domain protein 
Protein accessionYP_003182373 
Protein GI257791767 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000000426305 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGTTCA CCAACATCCT CGTGCCGTTC GACAAGTCCG ACCACGCACT GCACGCGCTC 
ACGCTGGCCA AGGGCTTGGC GGAAGAGGAC CCCGCCATCA AGCTGCACGT CGTCAGCGTG
GTATTCGTTT CGGACATCCC GCCCGCGCTC GGGCTCGACG CCAACCCCTA CGAGAGCGCT
CCCCCGCTGG TCATCCAGCC CGACCTGTAC AAGAAGCTCG TCGAAGCGGC GCTCGACCGC
GAGGAGAACG ACATGAAGCA GGCCATCGGC GGACTGCTCG ACGGCCTGCC CAACGACGTG
GACATCGTGG CCGCCAACGC GCCGTCGCCC GTCGACGGCA TCAACGACTT CGCGAAGGAG
CACGGCTGCG ACCTCATCGT CATGGGCTCG CGCGGCCTCG GCGTGCTGCG CGGCATGCTG
GGCAGCGTCA GCTACGGCGT CCTGCGCTCC GCGGAGATCC CCGTCCTCGT GGCGAAGAAG
GACGAGGACG GGAAGTAG
 
Protein sequence
MKFTNILVPF DKSDHALHAL TLAKGLAEED PAIKLHVVSV VFVSDIPPAL GLDANPYESA 
PPLVIQPDLY KKLVEAALDR EENDMKQAIG GLLDGLPNDV DIVAANAPSP VDGINDFAKE
HGCDLIVMGS RGLGVLRGML GSVSYGVLRS AEIPVLVAKK DEDGK