Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_1976 |
Symbol | |
ID | 8416287 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | - |
Start bp | 2314538 |
End bp | 2315437 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 645024953 |
Product | CRISPR-associated protein, Csd2 family |
Protein accession | YP_003182329 |
Protein GI | 257791723 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3649] Uncharacterized protein predicted to be involved in DNA repair |
TIGRFAM ID | [TIGR01595] CRISPR-associated protein, CT1132 family [TIGR02589] CRISPR-associated protein, Csd2 family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.856064 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGATA CGATCAAGAA CCGTTACGAC TTCGTCGTGT ACTTCGATGT GGAGAACGGT AACCCCAACG GCGATCCCGA TGCCGGCAAC ATGCCGCGCA TCGATCCCGA GACGAGCCTC GGCATCGTGA CTGACGTGTG CTTGAAGCGC AAGATCCGCA ACTACGTGGA GACGGTGAAG GAAGGCGAGC GGGGTTTCGA GATATACATC AAGGACGGCG TGCCGCTCAA TGCGAGCGAC CGACGGGCGC TCGACGAGTT CGGCGTGGGA ACCGATGATA AAGCCATCAA AAAACTCAAG AAAGACGATC CTGCGCTCGA CGAGAAGATT CGCGATTTCA TGTGCGAGAC ATTCTATGAT GTGCGCACGT TCGGTGCGGT GATGACCACG TTCGTCAAAG GCGCGCTCAA CTGCGGGCAG GTGCGCGGGC CGGTGCAGCT GACGTTCGCG CGCAGCGTCG ATCCTATCAT TCCGCAGGAG GTCACCATCA CGCGCGTAGC CATCACCACC GAAGCCGATG CCGAGAAGAA GGGCACCGAG ATGGGTCGCA AGTACGTGGT TCCCTATGCG CTCTATCGCG GGGAGGGCTA CGTTTCGGCG AACTTGGCGC GCAAATCGAC GGGATTCTCG GAGGACGACC TCGCCCTTCT GTGGGATGCT ATCGTCAACA TGTTCGAGCA CGATCACTCG GCTGCGCGCG GCAAGATGGC GGTTCGTGCG CTCGTGGTGT TCAAGCATGA CAGCGAGCTT GGCAATGCGC CGTCGTACAA GCTGTTCGAC GCTGTTTCAA CCCAGAAGAA AGCCGGCGTG GAGGCTCCGC GTTCCATCGA CGACTACGAG GAGATCACCG TTGACGAGGG CGCCGTGCCC GAGGGAGTCA CGGTTCTGAG GATGGTGTAG
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Protein sequence | MSDTIKNRYD FVVYFDVENG NPNGDPDAGN MPRIDPETSL GIVTDVCLKR KIRNYVETVK EGERGFEIYI KDGVPLNASD RRALDEFGVG TDDKAIKKLK KDDPALDEKI RDFMCETFYD VRTFGAVMTT FVKGALNCGQ VRGPVQLTFA RSVDPIIPQE VTITRVAITT EADAEKKGTE MGRKYVVPYA LYRGEGYVSA NLARKSTGFS EDDLALLWDA IVNMFEHDHS AARGKMAVRA LVVFKHDSEL GNAPSYKLFD AVSTQKKAGV EAPRSIDDYE EITVDEGAVP EGVTVLRMV
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