Gene Elen_1975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1975 
Symbol 
ID8416286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp2313873 
End bp2314535 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content60% 
IMG OID645024952 
ProductCRISPR-associated protein Cas4 
Protein accessionYP_003182328 
Protein GI257791722 
COG category[L] Replication, recombination and repair 
COG ID[COG1468] RecB family exonuclease 
TIGRFAM ID[TIGR00372] CRISPR-associated protein Cas4 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.360978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTACGACG AGGACGAGTT CCTCGCGCTG TCTGGTATCC AGCACTTCGC GTTCTGTCGA 
CGACAGTGGG CGCTCATCCA TATCGAGCAA GCGTGGGCCG ACAACGTGTT GACAGCCCAA
GGCGAGCTCA TGCACAAACG CGCCCATGAT GAAGAGCTGC GCGAACGGCG AGGTGATACC
CTCGTCGTTC GCGGCTTGTC GGTGCATTCG CGTGCGCTCG GCTTGTCAGG GAAGTGCGAC
GTCGTCGAAT TCCGCAAGAA CTCGCATGGC CATACTCTCA CAGGAGAGGA TGGCCTTTGG
CGCGCTGTGC CGGTGGAGTA CAAGCGCGGT TCGAGCAAGG CGAACGATGC CGACCGACTG
CAATTGTGCG CACAGGCGTT GTGCTTGGAG GAGATGCTTG GGGCGGATGT GCCCATTGGG
TTCCTTTACT ACGGCGAAAC GCGTTCGCGC GAAAAGGTGG AGTTCGACGA GTCGTTGTGC
GCTTTGGTTG GCTCGATGGT GGAGGAGATG CATGCTTTGT ATCGACGCCG TCATACTCCA
CGGGTGAAGC CCTTTTCGGC CTGTCGGTCG TGCTCGTTGA ATGACCTCTG CCTGCCGCGC
GCCATCAATC GGGCGACGGT CGGGGAGTAT GTGGCCAAAA GGCTTTTCGA GGAGGAGCTA
TGA
 
Protein sequence
MYDEDEFLAL SGIQHFAFCR RQWALIHIEQ AWADNVLTAQ GELMHKRAHD EELRERRGDT 
LVVRGLSVHS RALGLSGKCD VVEFRKNSHG HTLTGEDGLW RAVPVEYKRG SSKANDADRL
QLCAQALCLE EMLGADVPIG FLYYGETRSR EKVEFDESLC ALVGSMVEEM HALYRRRHTP
RVKPFSACRS CSLNDLCLPR AINRATVGEY VAKRLFEEEL