| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_1951 |
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| Symbol | |
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| ID | 8416260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Eggerthella lenta DSM 2243 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013204 |
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| Strand | + |
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| Start bp | 2288969 |
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| End bp | 2291437 |
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| Gene Length | 2469 bp |
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| Protein Length | 822 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 645024926 |
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| Product | DNA ligase D |
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| Protein accession | YP_003182304 |
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| Protein GI | 257791698 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3285] Predicted eukaryotic-type DNA primase |
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| TIGRFAM ID | [TIGR02776] DNA ligase D
[TIGR02777] DNA ligase D, 3'-phosphoesterase domain
[TIGR02778] DNA polymerase LigD, polymerase domain
[TIGR02779] DNA polymerase LigD, ligase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00524792 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCCC CTTTGGACGA CTACAACCGC AAGCGCAACT TCGACCGGAC GGCCGAGCCG
CCCGGCACCG CAGCGCCGCG CGACGACGGC GCCGCCGGCG GGTGCGACGG GCGCCTGCGC
TTCGCGGTGC AGCACCACCT GGCCTCGCGC GACCACTACG ACCTGCGCCT CGAATGGAAC
GGGACGCTGC TGAGCTGGGC CGTTCCCAAA GGTCCTTCGT ACAACCCCCG CGATAAGAGG
CTGGCCGTGC GCGTGGAGGA CCATCCGCTG GACTACCGCA CCTTCGAGGG CACCATCCCG
CAGGGCGAAT ACGGCGGCGG CACCGTCATG CTGTGGGACG AAGGCTGGTG GGAGCCGCTT
GTGGACGTGG AGCAGGGGTT GCGCGAGGGC GACCTGAAAT TCGCGCTGCA CGGGCATCGC
CTGAAAGGAG CCTGGGTGCT CGTGCATATG AAGCCGAAGA AGGGCGAGCG CGACGTGAAC
TGGCTGCTCA TCAAGGAGAA GGACGACTAC GTGCGCGCGG ATGCCGGCAT CGATGGGTTC
GAAACGTCCG TGCGAACCGG GCGCACCATG GACGAGATCG CGCGCGGGGA AGACGAGGCG
TTCGCCGCGA ACCCCTTCGA CCACGTGGAC GTCGAGCTGG CCAAGCTGGT GAGCTCGACG
CCGCCCGGCG ACAACTGGCT GTTCGAGGTG AAGTACGACG GCTACCGCAT CGTCGCATAC
GTCGAAGGCG GCCGGGCGCG CCTCGTCACG CGCAACGGCA ACGACTACAC CCGCCACTTT
CCCGCCATCG CGCGCTCCCT GGAAGACTGG GCGGCGGGAC GAGCGATGGT GCTCGACGGC
GAGCTCGTGG TAACCGACGA GGCCGGAAAG ACCGATTTCC AGGCGCTGCA GAACTTCCTG
CGCGACCCTT CGGGCAAGCA CCCCGCCTAC GTGGCGTTCG ACCTGCTGGC GTTCGAGGGA
GACGATCTGC GCGACCGGCC GCTCGCCGAG CGCAAGGAGC TGCTGGAGTC GCTGATGAGC
GACGCGCCCG ACAACCTGCG CTACAGCGTG CACGTGCGCG GCAACGGTGC GGACAGCTTC
CGCGCCGCCT GCAAGCAGCA TCTCGAAGGC GTGGTGGGCA AGCGGGCCGA TTCGCCGTAC
CGCGGCGTTC GCAACGGAGA CTGGATCAAG CTGAAATGCG GAAACGAGCG GGAATTCGTC
GTCGGCGGAT ACACGCAGTC CGCCAAGCGC GTGCGCGGGA TCAGCTCGCT CTTGCTGGGG
CAGTACGAGG ACGGCCGGCT CGCGTACGTC GGACGCGTGG GCTCGGGATT GAGCGAAGCG
ACCTCGCGCG AGCTGCTGGC CGCGTTCGAA GGCCTCGAGC GACCGGACGC GCCTTTCGCC
GACGCGCCGA AGCCGCGCCC GGGCGAGCGC GTCGTATGGC TGGACCCCCA AACGATCGTG
CAGGTGAAAT TCGCCGAATG GACCGAGGAC GGCCTGCTGC GACACCCCAG CTACCAGGGC
ATCCGCACCG ACAAAGACCC GCGCGACGTG CAACGGGAAC CCGCATCGGA ACCTGACGAG
CAAACCCCCG ACCGATTGGA GCGCCCCATG AATTCCGACA ACGAGAAGAA CGGCGAGCTG
CGCATCGACG GCGTTCGCAT CACGAACCCC GGCAAGCTGT TGTTCGAAGA CCCACCCATC
ACGAAGGAGG ACGTGGTGCG CTACTACGCC AGCATGGCCG ACCGCATGCT GCCCTACGCG
TCCGGCCGCA TCCTCAGCAT CGTGCGATGC CCGCGCGGCG CGGATTCGGC CTGCTTCTTC
AAGAAGCATC CCGGGCCTTC CACCCCGGGC GTGCGCACCG TGGACATCCC CACGAGCAGC
GGCGACGAGG AGCCGTACTT CTACGTGGAG GATGCCGTCG GGCTCGTGTC GGAAGCGCAG
ATGGACACGT TGGAGTTCCA TCTCTGGGGC AGCCGGGTGG ACACGCTCGA ACAGCCCGAC
ATGATGGTAT TCGACCTCGA CCCCGACAAG GGGCTCGGCC TCGAGCAGGT GCGGCGCGGC
GTGCGAGACC TGAAGGGCAT CCTCGACGAG CTGGGGCTGA AGTCGTTTCT CAAGACGAGC
GGCGGCAAGG GCTACCATGT GGTGCTACCG TTTCAGCCGG CAGCTTCCTG GGACGCGTTC
CACGACTTCG CGCGGCGCAC AGCCCAGGTG ATGGCCGAGA AGTGGCCCGA CCGCTACACG
AGCAACGTGC GCCTGGCGAA GCGCACCGGC AAGGTGTTCA TCGACTGGAT GCGCAACGGG
CGCGGCGCCA CGAGCATCGC CCCGTACTCC CTGCGCGCCC GCAGCGGCGC GCGCGTATCG
ATGCCGCTCA GCTGGGAAGA GCTGGACGAG GCGGCGCCCG ACGCCTTCAC GATGCACGAC
GCGCTCGCGC GCATCGAGGG CGACGACCCG TGGGACGGCT ACTTCGACGT CGACCAGGCA
CTCGAGTAG
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| Protein sequence | MTSPLDDYNR KRNFDRTAEP PGTAAPRDDG AAGGCDGRLR FAVQHHLASR DHYDLRLEWN
GTLLSWAVPK GPSYNPRDKR LAVRVEDHPL DYRTFEGTIP QGEYGGGTVM LWDEGWWEPL
VDVEQGLREG DLKFALHGHR LKGAWVLVHM KPKKGERDVN WLLIKEKDDY VRADAGIDGF
ETSVRTGRTM DEIARGEDEA FAANPFDHVD VELAKLVSST PPGDNWLFEV KYDGYRIVAY
VEGGRARLVT RNGNDYTRHF PAIARSLEDW AAGRAMVLDG ELVVTDEAGK TDFQALQNFL
RDPSGKHPAY VAFDLLAFEG DDLRDRPLAE RKELLESLMS DAPDNLRYSV HVRGNGADSF
RAACKQHLEG VVGKRADSPY RGVRNGDWIK LKCGNEREFV VGGYTQSAKR VRGISSLLLG
QYEDGRLAYV GRVGSGLSEA TSRELLAAFE GLERPDAPFA DAPKPRPGER VVWLDPQTIV
QVKFAEWTED GLLRHPSYQG IRTDKDPRDV QREPASEPDE QTPDRLERPM NSDNEKNGEL
RIDGVRITNP GKLLFEDPPI TKEDVVRYYA SMADRMLPYA SGRILSIVRC PRGADSACFF
KKHPGPSTPG VRTVDIPTSS GDEEPYFYVE DAVGLVSEAQ MDTLEFHLWG SRVDTLEQPD
MMVFDLDPDK GLGLEQVRRG VRDLKGILDE LGLKSFLKTS GGKGYHVVLP FQPAASWDAF
HDFARRTAQV MAEKWPDRYT SNVRLAKRTG KVFIDWMRNG RGATSIAPYS LRARSGARVS
MPLSWEELDE AAPDAFTMHD ALARIEGDDP WDGYFDVDQA LE
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