Gene Elen_1918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1918 
Symbol 
ID8416222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp2250330 
End bp2251202 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content50% 
IMG OID645024888 
Productglycosyl transferase family 2 
Protein accessionYP_003182271 
Protein GI257791665 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.238052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.00463208 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGAGTCTT TACGCGACGA TAAGACGCGC GCCTTCGAAG TGCGAAAGTT CTGCTCCATA 
CACGCCGGCG CTGACGAGCA TCTGATCGAG TTTTGGGAAT TCGGCGAGGC CGACGCCCCA
CTCGTGAGCA TCATCATTCC TCTTTACAAC TGCGAGCGAT ATCTGGCTGA AACATTGGAT
TCGATCGTAT CTCAAAGCCT GTCTTCCTGG GAGGCGATTC TGGTTGACGA CTGCAGTTCG
GATGGATCGC TTGAGATAGC CCTTCAGTTT TCGGAGCGGG ATCATCGTTT CGTCGTATTG
AGAAACGATT GCAACAGGGG AGCGGCTTTT TCTAGGAACA GGGCTTTAGC GGCTGCGTGC
GGCAGGTTTA TTGCCTATTT GGATTCCGAC GACTACTGGA AGAAAGAGAA GTTGGAGAGG
CAGATCACCT TCATGACCGA GAACCGTTTC GGAGCATGCA TGACGTCGTA CGAGACGGTG
AACGAAGACG GAAGCTTTCG CAACATCGTT CATATCGATG AGCGTCTCGA CTATAAAAAA
TTTCTGAAAA AACCTCCCAC CTGCTCGCAC ACGATCATGT TCGATACCGA GCTCGTCGAT
AAAAAAGCTC TCGTCATGCC GGATATACGA AAAAGGCAGG ATGCCGCAAC GTGGCTCCAG
GTTATAAAGC TGTACGGATG TCTTCATGGG TTCGATGAAG TGTTGGCGGC GAATAGGAAG
CGAAGCGATT CGCTCAGCGC GAATAAGGTT TCGGCAGTGA AGGGAACATG GTTCCTGTAT
ACGGAGATTG AAGGTTTGAG CAAGCCATAT GCAGGCTACT GCCTGTTTTG GCAGATGTTT
CATGCAGTTC TGAAGAGAAT AGGAAAACGG TAA
 
Protein sequence
MESLRDDKTR AFEVRKFCSI HAGADEHLIE FWEFGEADAP LVSIIIPLYN CERYLAETLD 
SIVSQSLSSW EAILVDDCSS DGSLEIALQF SERDHRFVVL RNDCNRGAAF SRNRALAAAC
GRFIAYLDSD DYWKKEKLER QITFMTENRF GACMTSYETV NEDGSFRNIV HIDERLDYKK
FLKKPPTCSH TIMFDTELVD KKALVMPDIR KRQDAATWLQ VIKLYGCLHG FDEVLAANRK
RSDSLSANKV SAVKGTWFLY TEIEGLSKPY AGYCLFWQMF HAVLKRIGKR