Gene Elen_1861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1861 
Symbol 
ID8416165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp2188518 
End bp2189702 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content63% 
IMG OID645024831 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_003182214 
Protein GI257791608 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.128157 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.323931 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTCG CATACACCGA GGAACAGCTC CGCATCAAGA AGGGCATCCG CGAGTGGGCC 
AAGGAGAACC TGACGGAGGA GGTCATCGCG GCCGGCTACA AGAACCGCGG CATCGCTCCC
GAAGTGGCGA AGGCGTGGGT CGATTCGGGT TGGGGCATGT ACGGCCTGCC CGAGGAACAC
GGTGGAAAGC CCGTCGACCA TCAGACGATG GCCATGATCA TCGAAGAGCT CAACCATGCC
GGCGGCAACA TCCCCATGGC TCCCAACCTG CTCATCATGT TCGACGTGTG CGAATTCGGC
ACGCCGGAGC AGATCAAGTT CGCGATGGAC TACTACAAGG AGAACGGCTA CCCGCCGTAC
TGCCTGGCCA TCTCCGAGCC CGAAGCGGGC TCTGACAACC AGGGCATGGA GTGCTTGGCC
ACCCGCACGG GCGACGGCAA GGTGCACATC AACGGCGTGA AGACCTGGGT GACCCAGGGC
GAGCACGTTG ACGGCTTCAT CGTGGTGTGC AAGGACGAGG ATCCGTCTCG CGAGAACAAG
AACATGTCCA TGTACCTGGT GCCGGCGAAC GCGCCGGGCG TCACCATCGA GCCGCTCAAC
AAGATCGGCA TGCAGATCAT GCCCTTCGCG ATGATCCACT TCGACGACGT GGTCATCGAC
GAGACCGACC TCCTGGGCAT CCAGGGCAAG GGCTTCTACC AGCTCATGAA GAACTTCGAG
TGGGAGCGCT GCGTGCTTCT GGCCGAGCTG CTCGGCGAGG CGCAGGCCGC CATGGAGGAC
GCGTGCGCCT GGACCAACGA GCGCATGCAG TTCGGCAAGG GCATCAAGAC CTACCAGCTC
GTGCAGGAGC ACATCGTCGA GATGCAGATC GAGCTCTCGA ACACGCGTAA CTTCCTGTAT
CGCACCTGCT GGAAGATGGA CAACGGCATC CCGGTGAACA ACGACGCCGC CATGCTCAAG
CGCTACGGCG CTCCGGCGCT CACCGACTGC TGCTCGCGCG CGCTGCAGCT CATGGGCGGC
CTCGGCTTCA CCGACGAGAC CCGCGTGTCC CGCCTCATGC TGGACTGCCG CGGCTTCCAG
ATCGGCGGCG GCACGGTGGA GATCATGGTG CACATCTCCG GTCGCGGCAT CCTCAAGGAG
TACGCGAAGG TCGTCGAGGA TCCCGATTAC CTGTACACGA TCTAA
 
Protein sequence
MDFAYTEEQL RIKKGIREWA KENLTEEVIA AGYKNRGIAP EVAKAWVDSG WGMYGLPEEH 
GGKPVDHQTM AMIIEELNHA GGNIPMAPNL LIMFDVCEFG TPEQIKFAMD YYKENGYPPY
CLAISEPEAG SDNQGMECLA TRTGDGKVHI NGVKTWVTQG EHVDGFIVVC KDEDPSRENK
NMSMYLVPAN APGVTIEPLN KIGMQIMPFA MIHFDDVVID ETDLLGIQGK GFYQLMKNFE
WERCVLLAEL LGEAQAAMED ACAWTNERMQ FGKGIKTYQL VQEHIVEMQI ELSNTRNFLY
RTCWKMDNGI PVNNDAAMLK RYGAPALTDC CSRALQLMGG LGFTDETRVS RLMLDCRGFQ
IGGGTVEIMV HISGRGILKE YAKVVEDPDY LYTI