Gene Elen_1724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1724 
Symbol 
ID8416023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp2030619 
End bp2031419 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content68% 
IMG OID645024690 
Productputative transcriptional acitvator, Baf family 
Protein accessionYP_003182078 
Protein GI257791472 
COG category[K] Transcription 
COG ID[COG1521] Putative transcriptional regulator, homolog of Bvg accessory factor 
TIGRFAM ID[TIGR00671] pantothenate kinase, type III 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.345789 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.471645 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAACG GAAGGGACGC AGCGCGCACG GTGCTATGCG TGGACGTGGG GAACTCGGAT 
ACGAACCTGG GCCTCTTCGT CGGCGGCGAG CTGGAAGCCA CCTGGAAGGT GACCACGACG
GAGCGCATGA CGGCCGACGA GGCGCGCATG CGGATGGCGG GGCTGTTCGA CATGCTGGAG
CGCGACGGCC GTCGTGCGAT CTGCGACGAT GCCGTCATCG CGTCGGTGGT GCCGGGGCTC
ACGGATGCAT GGGTGACCGC GACGCGCGCG CTTACCGGCC GACGCCCCCT CGTGGTGGGA
CCCGGCGTGA AGACGGGCGT GAAGATGCGC TACAACGACC CCGGCGAGCT GGGAGCCGAC
CGGGTAGCCG ACCTCGTTGC CGCCCGCACG GCCTATACGG CGCCCTTCAT CGTGGTGGAT
CTGGGCACGA CGACGAACTT CGAGGTGGTT GACGAGGGCG GCTCGTTCGT GGGCGGCATC
ATCGCGCCCG GCGTGAAGCT GTCGGCGAAG GCGCTGTCGG ATGCCGCCGC GCAGCTGGCG
ATGGTCGATC TCAAGGCCCC GGCATCGGTG GTGGGCAAGA ACACGCGCGA GGCCATGCAG
GCGGGCGTCG TGATGGGGGA GGTCGCGCTC ATCGACGGCC TCATCGACAT GGTATGGCGC
GAACTGGGCT ACGAGACCGA CGTCATCGCC ACGGGCTCGG ATGCCGCTGC CATCGCCGCG
CTGTCGCAGC GCGTCGCCCG TACCGACGAA CATCTCACCC TGCGGGGCCT GAGCATGTTG
CACACGTTGA ACCGTCGTTA A
 
Protein sequence
MDNGRDAART VLCVDVGNSD TNLGLFVGGE LEATWKVTTT ERMTADEARM RMAGLFDMLE 
RDGRRAICDD AVIASVVPGL TDAWVTATRA LTGRRPLVVG PGVKTGVKMR YNDPGELGAD
RVADLVAART AYTAPFIVVD LGTTTNFEVV DEGGSFVGGI IAPGVKLSAK ALSDAAAQLA
MVDLKAPASV VGKNTREAMQ AGVVMGEVAL IDGLIDMVWR ELGYETDVIA TGSDAAAIAA
LSQRVARTDE HLTLRGLSML HTLNRR