Gene Elen_1576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1576 
Symbol 
ID8415875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1873038 
End bp1873691 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content65% 
IMG OID645024545 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_003181933 
Protein GI257791327 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID[TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.232036 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACAGA AGGATGAGGG CTGCGCAGCC GACCAGGTGA GCGACCGCAT CTTCACCGTG 
CCGAACATCA TCTCGTTCGT CAGGCTGTGC CTCGTGCCCG TCTTCCTTGT GCTGCTTCTC
AACGGTTTCA ACGTCGCGGC TACGCTGCTG TACGCGCTGG CAGCGGGCAC CGACTGGATC
GACGGGCAGA TCGCCCGCCG GACGAATGCC GTGTCCCGTC TGGGCCAGCT GCTCGATCCG
GCGGTCGACC GCATCCTCAT GATCTCGGGC GTGTGCGGCC TGTTCCTCGT GGGACGTCTG
CCGCTGTGGA TCATCCTCGT GGTGCTCGTG CGCGATCTGC TGCTGCTCAT GGGCGGCGCG
GTGCTGCTCA AGCGCTTTCG CGTGCGCGTG GCCGTCATCT TTCCGGGCAA GGTGGCCACG
ACGCTCTTGT TCGTCGGCTT CGCCGGCCTG CTGCTGAACT GGCCGCTCGT ACCGGGACTC
GGTCTCGTGG ACGCGGCTTG GTTGCCGGGT TTGAACGGGC TGCCCTGTTC GTGGGGCATC
TGGTTCGTAT ATGCCGGACT TGCGCTGGGG CTGGTCACTA CCGCGTATTA CATCGCTGCG
GCACTGCGGA AGCTGCGTGC TGTCAAGGAT GCGCAGGCGG AGAGCACGCG GTAG
 
Protein sequence
MGQKDEGCAA DQVSDRIFTV PNIISFVRLC LVPVFLVLLL NGFNVAATLL YALAAGTDWI 
DGQIARRTNA VSRLGQLLDP AVDRILMISG VCGLFLVGRL PLWIILVVLV RDLLLLMGGA
VLLKRFRVRV AVIFPGKVAT TLLFVGFAGL LLNWPLVPGL GLVDAAWLPG LNGLPCSWGI
WFVYAGLALG LVTTAYYIAA ALRKLRAVKD AQAESTR