Gene Elen_1550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1550 
Symbol 
ID8415848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1841187 
End bp1842134 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content69% 
IMG OID645024518 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_003181907 
Protein GI257791301 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.213106 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0477313 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTTC AAACAAGCGA GGCCATAGAG GGGGCGCCGG CGGATCAGCG CCGCCCCGCC 
GTGCGCGGGC ATGCGCTGGC GTTGGTCACC GTGGTGGTGT GGGCGGTCAC GTTCGTATCC
ACGAAGGTGC TGCTCGTGCA CCTCGCACCC ATCGAGATCC TGTTCTTCCG CTTCGTCATC
GGGTTCGTCG CGCTCGCGCT CCTGCGCCCG CGCATCCTGC ACGTCCGGGG CTTCAAGGAG
GAGCGGTGGT TCATGCTGGC GGGCGCTACC GGCGTGACGG TGTACTACCT GCTGGAGAAC
ATCGCGCTCA CGTTCACCAC GGCCTCCATC GTGGGCGTGG TGGTGGCCGC GGCGCCGCTG
TTCACCGGCG TCGCGTCGGC TGTCGTGCTG AAAGAGCGCC TGCGCGCGCC GTTCTTCGTC
GGCTTCGCGG TGGCCATGGC GGGCGTGTGC CTGGTCAGCT TCGCGGGCGG CGCGTCGGGC
GGCCTTGTCG CAGAAGGCGG GCTGGGGCAG GCGGGGCTCA TCGGCGTGGC GCTGGCCTTG
GCGGCGGCGG GCACGTGGGC CGTGTACTCC ATCGTGACGA AGAAGCTCTC GACGTTCGGC
TACGACAGCA TCCTCGTCAC GCGCCGCACG TTCGCCTGGG GTCTCGCGTT CATGCTTCCC
GCGCTGCCGC TTCTGGGCTT TTCGCCCGAT TGGGGCTCGC TCGCCGCGCC CGAGATGTGG
GGCAACCTCG TGTTCTTGGG GCTGGGCGCG AGCGCGCTGT GCTTCGTGAC GTGGAACATG
GCGGTGAAGG AGCTGGGGCC GGTGAAGACG AGCCTGTACA TCTACCTCGT GCCGGCGCTC
ACCGTGCTGG CCTCGGCCGC CGTGCTGGGC GACCCGCTCA CCCCGCCGGT CGTCGCCGGA
GTCCTGCTTA CTATAGCAGG GCTGTTCCTT TCCGAGCGCG GGAAGTAG
 
Protein sequence
MAVQTSEAIE GAPADQRRPA VRGHALALVT VVVWAVTFVS TKVLLVHLAP IEILFFRFVI 
GFVALALLRP RILHVRGFKE ERWFMLAGAT GVTVYYLLEN IALTFTTASI VGVVVAAAPL
FTGVASAVVL KERLRAPFFV GFAVAMAGVC LVSFAGGASG GLVAEGGLGQ AGLIGVALAL
AAAGTWAVYS IVTKKLSTFG YDSILVTRRT FAWGLAFMLP ALPLLGFSPD WGSLAAPEMW
GNLVFLGLGA SALCFVTWNM AVKELGPVKT SLYIYLVPAL TVLASAAVLG DPLTPPVVAG
VLLTIAGLFL SERGK