Gene Elen_1516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1516 
Symbol 
ID8415814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1809827 
End bp1811014 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content53% 
IMG OID645024484 
Productrestriction modification system DNA specificity subunit 
Protein accessionYP_003181873 
Protein GI257791267 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.205219 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGAGA CGAAGGACAG TGGCGTTGAC TGGATCGGCG AGGTGCCGGT CAACTGGGAA 
ATCGTTCCGA TAAAGGCGGA TGTTTCAATT GGACATGGCT CCGACCCCAC AACGCCTGGT
GATATTCCGG TTTGGGGCAG CGGGGGCGAA CCCTTTAAAA CCTGTGGCGA GCATAAGAAT
GGGCCAGCGG TGCTTCTTGG ACGAAAGGGA ACATTAGATT GCCCCCAACT TGTTACCGGG
CTCTACTGGA ACGTCGATAC AGCTTTTGAT GCGAAAATCA CAAGTAAAAA GCTCTCACTG
AAGTTCTTCT ACTATGCTGC AACCTGTGTT GACATTAAGC CATATATGAC CAACACGGCT
AAGCCGAGTA TGACTCAATT TGACTGGGAC AATTCGAGAA TCCCCCGCCC TCCACTTGCG
GAGCAGCGAC GAATCATCTC ATACCTCGAT GAGCGCTGCG CGGCCATCGA CGAGGATGTC
GCGAAGCGTC GCGATGTCAT CGGGAAGCTC AAGGAATACA AGAAGTCACT CATTGCGCAT
GCCGTGACGA AGGGCCTCGA CCCGAACACA GAGATGAAGG ACAGCGGAGT CGACTGGATC
GGCGAGGTGC CGGCGAATTG GCGTCTAACG AAAATCGGAC AGGTCTATGA CCTGCGCAAC
ACGAAAGTCA GCGATTGCGA TTACGAGCCA TTGTCCGTAA CCATGCAAGG CATCGTTCCT
CAACTTGATA GCGCTGCCAA GACCGATGCG CATGACGATA GGAAGTTGGT TATGGAGGGA
GACTTCGTAA TCAACAGCAG GTCAGATAGA CGTGGATCAT GCGGAATAGC AAGACAAGAT
GGCTCCGTAT CCCTTATCAA TACGGTACTT ATCCCCCGAG AACATATGGA GCCACGCTTC
TATGACTGGT TGTTTCACAC GACCCTATTT GCTGATGAGT TTTATAAGAA CGGTCACGGA
ATAGTAGACG ACCTTTGGAC CACAAAATGG GCAGAGATGA AGGGCATCAC CATAGTTGAA
CCCCCATTTG AAACGCAAAT AACCGTCGCG AACTACCTCG ACGAGCGCTG CGCGGCCATC
GACGAGGCAA TCGCCCGCCA GGAGCAGCTC ATCGAGAAGC TCGGCGAGTA CCGCAAGTCC
GTCATCCACC ACGCCGTGAC CGGCAAAATC GACTGTATGG AGGCCTAA
 
Protein sequence
MRETKDSGVD WIGEVPVNWE IVPIKADVSI GHGSDPTTPG DIPVWGSGGE PFKTCGEHKN 
GPAVLLGRKG TLDCPQLVTG LYWNVDTAFD AKITSKKLSL KFFYYAATCV DIKPYMTNTA
KPSMTQFDWD NSRIPRPPLA EQRRIISYLD ERCAAIDEDV AKRRDVIGKL KEYKKSLIAH
AVTKGLDPNT EMKDSGVDWI GEVPANWRLT KIGQVYDLRN TKVSDCDYEP LSVTMQGIVP
QLDSAAKTDA HDDRKLVMEG DFVINSRSDR RGSCGIARQD GSVSLINTVL IPREHMEPRF
YDWLFHTTLF ADEFYKNGHG IVDDLWTTKW AEMKGITIVE PPFETQITVA NYLDERCAAI
DEAIARQEQL IEKLGEYRKS VIHHAVTGKI DCMEA