| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_1449 |
|---|
| Symbol | |
|---|
| ID | 8415747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 1728667 |
|---|
| End bp | 1729458 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 645024418 |
|---|
| Product | Rhomboid family protein |
|---|
| Protein accession | YP_003181807 |
|---|
| Protein GI | 257791201 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.6312 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.568925 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCATACA AGGTGAACGA GCCGGTGGAA CCGCAACAAA GGGCGGTCAT CGATGACGAC
CAGCTGAAAC GGATGATGGC GGACAGCCAG CCGAGCTTCT TCGAGCGCAA CCGTTATCGG
CTGGTCACGC TCGCGCTCAT CGCGATCAAC GTCGCCGTGT TCGCGCTCGA GGCGGTGCTG
TCCGGCATGC GCATCGACAT TTCCACGCGC ACCCTCGTGG ACATGGGCGC GATGTACGCG
CCGCTTGTCC AGTCGCCGGC CGACCTGTAC CGCTTCGTCA CGCCGATGTT CCTTCATATG
GACCTCATGC ACCTCGGTTT CAACATGGTG GCGCTGTACA GCGTGGGCGA GGTGTTGGAG
CGCACCCTGG GCAAGGGAAG CTATCTTGCG CTGTACTTCA TCGCGGGAAT AACGGGCAAT
GCGGTGTCCT ATGCGGCCGA TGTGCTGCTC GGCGGCGGCT CCGCGGTGAG CGCCGGAGCT
TCGACCAGCG TGTTCGGCCT GTTCGTGGCC GTGGCGCTGT TAGCCGTGCT GCATAAGGGG
AACCGTTCGC TCTTCACGCA GTACAGCAAG GGCATGTTGG GGGTCATCGC CGTGAACGTG
GCGTACACGC TGCTCGTGCC GAATATCTCC GTGAGCGGGC ATCTGGGAGG GGCGCTTGGC
GGGCTCGTCG CCATGTTCAT GATCCCGGCA GCCAGCCTGC GCGTGCCGAA TCCCGTGCGC
GTCGTCGTGG CCGTGCTGTG GGTGGCGGCG CTCGTGTGGC TGCTCGTTTC GCAAGGGGTG
CTCGGTGTCT AG
|
|---|
| Protein sequence | MPYKVNEPVE PQQRAVIDDD QLKRMMADSQ PSFFERNRYR LVTLALIAIN VAVFALEAVL
SGMRIDISTR TLVDMGAMYA PLVQSPADLY RFVTPMFLHM DLMHLGFNMV ALYSVGEVLE
RTLGKGSYLA LYFIAGITGN AVSYAADVLL GGGSAVSAGA STSVFGLFVA VALLAVLHKG
NRSLFTQYSK GMLGVIAVNV AYTLLVPNIS VSGHLGGALG GLVAMFMIPA ASLRVPNPVR
VVVAVLWVAA LVWLLVSQGV LGV
|
|---|
| |