Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_1376 |
Symbol | |
ID | 8415674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | + |
Start bp | 1644079 |
End bp | 1645497 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 645024345 |
Product | signal recognition particle protein |
Protein accession | YP_003181734 |
Protein GI | 257791128 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0541] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00010418 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.848046 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGAGA ACCTATCGAC GCGCCTGCAG GGCATATTCA GCGGTCTGCG CGGCAAGGGT CGCCTGACCG AGGACGATAT CAACGACGCC ATGCGCGAGA TCCGCATGGC GCTTCTGGAA GCGGACGTCA ACTTCAAGGT GGTGAAGTCG TTCGTCGCCC GCACGAAGGA GCGCTGCCTC GACGCCGAGG TGCTCGATTC GCTCACGCCG GCGCAGAACG TCATCAAGAT CGTGCTCGAC GAGCTGACCG AGCTGTTGGG CCGCACCGAC AGCAAGCTCG TCCTGAGCAG CCGCATCCCC AACGTCATCA TGCTGGTAGG CCTGCAGGGC TCCGGCAAGA CGACGGCTGC CGCGAAGCTG GCCTACCGCC TGAAGCAGGA GAACCATTCG CCCCTGCTCG TGGCCTGCGA CGTGTACCGC CCCGCCGCGG CCGACCAGCT GGAAACCCTC GGCGGCGAGA TCGGCGTGCG CGTGTACCGC GGCGACGGCC AGGATCCGGT GAAGATCGCG CAGGAGGGCA TCCAGGACGC CATCGACAAC CTGCGCGACG TGGTCATCGT GGACACGGCG GGCCGTCTGC ACGTGGACGA CGAGATGATG GACGAGGCCG AGAACATCAA GCGCGCCGTG AAGCCCGACC AGATCCTCAT GGTGGTGGAC GCCATGACCG GCCAGGACGT GGTGAACGTG GCCAGCGCGT TCTCCCAGCG CGTCGACTTC GACGGCGTCA TCATGTCGAA GATGGACGGC GACGCCCGCG GCGGCGGCGC GCTTTCCATC AAGCAGGTCA CCGGCAAGCC TATCAAGTTC ATCTCGTCCG GCGAGAAGCC GGACTCGCTC GAAGAGTTCC ACCCCGACCG CATGGCGAAG CGCATCCTGG GGATGGGCGA CGTGGTCAGC CTCATCGAGA GCGCCGTCAA GGTGCAGCAG GAGGAAGTGG AGCAGGAGCA AGCCGAGCGC ATGATGCGCG CGAACCTCAC GCTCAACGAC TTCATCGATA TGAACCGACA GATCCGCAAG ATGGGCGGCG TGTCGAAGCT GCTGTCGGCC TTGCCGGGCG GCGACAAGGC CATGGCCGCC GGCCAGGTGG ACGAGAATGC GTTCGACCAC ATGGAGGTCA TCATCAACTC CATGTCGAAG GCCGAGCGCG AGAAGCCCGA GCTGTTGAAC GGCTCGCGCC GCGCGCGCAT CGCGGCCGGT GCAGGCGTGA GCGTCTCGGA CGTGAACCAG CTCATGAAGA AGTTCAACGA GACGAAGAAG ATGATGAAGA AGATGATGCC TGCCGTGGAG GAGATGCAGG GCGGCAAGAA GGGGAAGAAG GGGAAGAAAG GCCGCAGGCG CCGCATGGGA CTGCCCGGCG GCATGGGCGG CATGAACATG GCCGACCTCA AGAAGCTCCA GGACATGCTG GGCGAGTAG
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Protein sequence | MLENLSTRLQ GIFSGLRGKG RLTEDDINDA MREIRMALLE ADVNFKVVKS FVARTKERCL DAEVLDSLTP AQNVIKIVLD ELTELLGRTD SKLVLSSRIP NVIMLVGLQG SGKTTAAAKL AYRLKQENHS PLLVACDVYR PAAADQLETL GGEIGVRVYR GDGQDPVKIA QEGIQDAIDN LRDVVIVDTA GRLHVDDEMM DEAENIKRAV KPDQILMVVD AMTGQDVVNV ASAFSQRVDF DGVIMSKMDG DARGGGALSI KQVTGKPIKF ISSGEKPDSL EEFHPDRMAK RILGMGDVVS LIESAVKVQQ EEVEQEQAER MMRANLTLND FIDMNRQIRK MGGVSKLLSA LPGGDKAMAA GQVDENAFDH MEVIINSMSK AEREKPELLN GSRRARIAAG AGVSVSDVNQ LMKKFNETKK MMKKMMPAVE EMQGGKKGKK GKKGRRRRMG LPGGMGGMNM ADLKKLQDML GE
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