Gene Elen_1326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1326 
Symbol 
ID8415624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1591049 
End bp1591726 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content61% 
IMG OID645024295 
Productpeptidase M50 
Protein accessionYP_003181684 
Protein GI257791078 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.38165 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.352309 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCGA TACCCTACCT CATATGCTCC ATTCTGAGCT TCGTGCCCGC CATCGTGTGC 
CACGAGGCGT GCCACGGCTT CGCCGCCTAC AAGCTGGGCG ATCCCACGGC CAAGCGCGCG
GGACGGCTGT CGTTCAACCC GCTCAAGCAC ATCGACCCCT TCGGCACGGT CATCATGCCG
CTTCTGCTCA TGGCCATGAA CATGCCGGTG TTCGGCTACG CGAAGCCGGT GCCGTACAAC
CCAGCCTACT TCAAGGACCC GCGCAAGGGC GACCTCATCG TGGGCCTCGC CGGGCCTGCG
GCCAACCTCG TGCTGGCCGT CCTGGGCGCA GTCGTGTACA CGCTCGTCAT GCTCGTGCTG
CCGGTGAGCG CGCTGGCGCA GAACGACGTC TTCTACTACT TCCTCACGTT GTTCCTTCCC
ATGTTTTCGC TCATCAACCT GTACCTCATG TTCTTCAACC TGCTGCCCAT CCCGCCGCTG
GACGGCTCGT CCATCTTCGC GTTCTTCCTG CCGCAGAAGT ATCTGCCGCA GTATTACAAA
GTGCAGCGCT ACGCGATGCC GGTGTTCCTC ATCGTGGTGC TCCTCGTGCC GTACGTGCTG
CATTTCAATC CTATCGGCAT CTATCTGGAC GCGACGGCCG GCAACGTGTT CGACCTGCTG
TTCTCCTTTG GCAGGTAG
 
Protein sequence
MISIPYLICS ILSFVPAIVC HEACHGFAAY KLGDPTAKRA GRLSFNPLKH IDPFGTVIMP 
LLLMAMNMPV FGYAKPVPYN PAYFKDPRKG DLIVGLAGPA ANLVLAVLGA VVYTLVMLVL
PVSALAQNDV FYYFLTLFLP MFSLINLYLM FFNLLPIPPL DGSSIFAFFL PQKYLPQYYK
VQRYAMPVFL IVVLLVPYVL HFNPIGIYLD ATAGNVFDLL FSFGR