| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_1322 |
|---|
| Symbol | |
|---|
| ID | 8415620 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 1586115 |
|---|
| End bp | 1588187 |
|---|
| Gene Length | 2073 bp |
|---|
| Protein Length | 690 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645024291 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003181680 |
|---|
| Protein GI | 257791074 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.225947 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCATGC AGCTTGAACA TATCTCGAAG TCGTTCGGAG GGCGCCAGCT CTTCCGCGAC
GTGACGTTCC GCCTGGAAGA ATACGAGCGC CTGGCGCTCG TGGGCCCGAA CGGCGCCGGC
AAGACCACTA TGCTCAACAT CATCTCGGGC GCCGAGGATC CCGACGAGGG CCGGGTGCTG
TTCGCGAAGG GCGCGCGCGT GGGCTACCTC GAGCAGGAGG CCATCGAGAT GGCCGACCAG
CCCATCTTCG AGGAGGTCAT GTCCTCGCAG GTGGAGGTGC TGGAAGCCGA GCGCCGCCTG
CACAAGCTGG AGGCCGAGCT GGGCGAGGCC CCCACGCCGC AGCAGCTTGC TGCCGCCGGG
CGCGCCCGCG ACGCCTACGA GGTGCTGGGC GGCTACACCA TCGAGGCGAA GGTGCGCAGC
GTCATGTTCG GCCTGGGCTT CAAGGAGGAC GACCTCGCGC GCTGCACCAC CGAGTTCTCG
GGCGGCTGGC AGATGCGTAT CGCGCTGGCG AAGCTGCTCA TCCGCAACCC CGAGGTGCTG
CTGCTCGACG AGCCCACCAA CCACCTCGAC CTGGAGAGCG TGAAGTGGCT CGAGGGCTTT
TTGCGCGGCT ACGCGGGCAC GGTCATCGTG GTCAGCCACG ACCGCGCGTT CATGGACAAC
ATGGTGGACC GCGTGGCCGA GGTGGACAAC GGCCAGGTGA ACCTCTACAA GGGCAACTAC
TCGGCCTACC TCAAAACGCG CGAGGAGCGC CTGGAGCGCC TGCGCGCCGA GGCGGCGAAG
CAGGCCGAGG AGATCGCCCA TATGGAGGCG TTCATCGAGA AGTTCCGCTA CAAGGCCACG
AAATCCAAGC AGGTGCAGGA TCGCGTGAAG AAGCTCGAGA AGATCAAGCG CATCGAGCTT
CCCGAGGAGA AGAAAACCGT CAAGTTCAAC TTCAAGCAGC CGCCGCGCAC GGGCGACGAG
GTGGTGCGCG CCCGCGGTCT CGTGAAGCGC TACGGCGACA AGGCCGTGTA CGACGGCTTC
GACTTCACCA TGTACCGCGG CGACAAGATC GCGCTCGTGG GCCCCAACGG CGCGGGCAAG
TCGACGCTGC TCAAGATGAT CGCGGGCGCC ATCGAGCCCG ATGCGGGCAC CATCGAGTAC
GGCGTGCACG TGTCGAAGAC CTACTACGCG CAGCACCAGC TGGAGGAGCT GCACCCCGGC
AACACCGTGT TCGAAGAGCT CGACCGCGTG GCGCCGGGTT GGAGCGTCTC GCAGGTGCGC
ACGCTGCTGG GCGCGTTTTT GTTCACGGGC GACGCGGTGG ACAAGAAGGT GAGCGTGCTG
TCCGGTGGCG AGAAGAGCCG CCTCGCGCTG GCGAAGATGC TGGTGGCCCC GCGGCCGCTT
CTGTGCCTCG ACGAGCCGAC GAACCATCTC GACATCGCCA GCGCCGACAT CCTGGAGCAG
GCGCTCAAGG TGTTCGAGGG CACGATACTC TTCATCACGC ACGACCGTCA CCTCATCCGC
GGGGTGGCGA ACCGCATCGT GGAGATCGAG CCCGGGCGCG CCACGAACTA CGACGGCGAC
TACGACTACT ACCTGTTCAA GAGCGGACAG CTGGACGGCG ACGGCCCTAG CGGCCCGTCG
CTTGTGGACG AGATGCTGGA CGAAGGCCCC AAAGCGAAGG CGGCGGGGAA GGGCAAGGAC
GCCAAGGGTG CGAAAGGGAA GGCGGTTGCT AAGACTCCGG CTGCGGCGAG CGGGTCCCAA
GCCGAGCTCA CGGCGCCGCG CGCGAGTTCG CCCAAGACCA AGGAGCAGAA GCGCCGCGAG
GCCGAGGCGC GCAACCGCGC CTACGCCGCG CTCAAGAACC ATCGCAAGCG AATCGCCGAG
CTGGACAAGC AGATGGAGCG CGACAACGCG CGCATGGCCG AGCTGCTGGA GCTCATGGCC
GACCCCGCCT TCTACATCAA CGAGGACGCC TCGTCTGACG CCGTGGCTGA GCACGCCAAG
CTCAAGCAGC GCCTGGCCGC CGCCGAGGAG GAGTGGTTCC TGCTCACCGA GGAGCTGGAG
GAAGAGATGG CGAGGCAGGC GGAGCAGCTG TGA
|
|---|
| Protein sequence | MIMQLEHISK SFGGRQLFRD VTFRLEEYER LALVGPNGAG KTTMLNIISG AEDPDEGRVL
FAKGARVGYL EQEAIEMADQ PIFEEVMSSQ VEVLEAERRL HKLEAELGEA PTPQQLAAAG
RARDAYEVLG GYTIEAKVRS VMFGLGFKED DLARCTTEFS GGWQMRIALA KLLIRNPEVL
LLDEPTNHLD LESVKWLEGF LRGYAGTVIV VSHDRAFMDN MVDRVAEVDN GQVNLYKGNY
SAYLKTREER LERLRAEAAK QAEEIAHMEA FIEKFRYKAT KSKQVQDRVK KLEKIKRIEL
PEEKKTVKFN FKQPPRTGDE VVRARGLVKR YGDKAVYDGF DFTMYRGDKI ALVGPNGAGK
STLLKMIAGA IEPDAGTIEY GVHVSKTYYA QHQLEELHPG NTVFEELDRV APGWSVSQVR
TLLGAFLFTG DAVDKKVSVL SGGEKSRLAL AKMLVAPRPL LCLDEPTNHL DIASADILEQ
ALKVFEGTIL FITHDRHLIR GVANRIVEIE PGRATNYDGD YDYYLFKSGQ LDGDGPSGPS
LVDEMLDEGP KAKAAGKGKD AKGAKGKAVA KTPAAASGSQ AELTAPRASS PKTKEQKRRE
AEARNRAYAA LKNHRKRIAE LDKQMERDNA RMAELLELMA DPAFYINEDA SSDAVAEHAK
LKQRLAAAEE EWFLLTEELE EEMARQAEQL
|
|---|
| |