Gene Elen_1290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1290 
Symbol 
ID8415585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1545968 
End bp1547779 
Gene Length1812 bp 
Protein Length603 aa 
Translation table11 
GC content64% 
IMG OID645024256 
ProductAmidohydrolase 3 
Protein accessionYP_003181648 
Protein GI257791042 
COG category[R] General function prediction only 
COG ID[COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0346185 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACGA ACCAACCATC GAACACGTTG TCCCGTAGGA AGTTCGTCAA AATCGGCGCG 
ACAGGAGCGG CCACGCTCTT CATCTTGCCG GCGCTTTCGG GCTGCGGAAG CGAAAACGGC
GAAGCGCAAA CGGACGAGGC GGAGGGAGGC GCCGGCGCCC AGCAGAAAAC GGCCACCCTC
GCGTTTCGCG GCGGCACGAT CCAAACCATG ACGTCCGAGA ACGACGTCGC CGAAGCCTTG
GCCGTCGACG GCAACGAGAT CGTCTACGTC GGCGACGAAG CGGGGCTCGA AGCCTTCGTG
GGAAGCGGCA CGAAGGTGAT CGACCTCGAG GGCGGCATGG TGGTACCCGG CTTCATGGAC
GGTCACATCC ACGCCCCGGG AGACTGGGTC ACCAAGCTCT ACGACATATA CCTCGGCGAC
GCGACCACCG TCGACGAGTA CGTGAAGATC ATCTCCGACT TCGTCGCGGC GCATCCCGAG
CGCGAGGCGT ACACGGGCAA CCCGTTCATG GTGAACGCGT TCCAGCTGGA GGACGGCAGC
AACCCCGGGC CGAACAAGAA GCTGCTCGAC GAGATCTGCC CCGACAAGCC CATCCTGCTT
TTGGACGTCT CGCATCACTC CGCCTGGGTC AACAGCAAGG CGCTCGAGAT GGCGAACATC
ACGCGCGACA CGCCCGACCC GCTCGGCGGC ATCATCACGA GGGACGAGGA CGGCGAGCCC
ACCGGATATC TCATCGACGG CGCCGCCACC GAAGTGTCCG CCCTCGTCGT GTCCGAGCAC
ACCGACGAAG AGTACGAGCA GGCCATCGCA AAGTACCAGG AGGACGCGTC GCGCTTCGGC
CTGACCGGCA TCACGAACCT CTCCGCCGTG GACGCGCGCT TCTTCTCCGA ACTGGAAAAG
GCCGGCGAGC TCAACCTGCG CATGAGGATC CTGCCCACCA TCATCCCCGG CACCGATCCG
AGCGAAGCGG TCAAAACAGT CAAGGGACTG GCACGCTACG ACAGCGAGAT GATATCCACC
GGCACCGCGA AGATGTTCTC CGACGGCGTC ACCGAAGGCG GCAGCGCCGT CATGCTGGAA
CCGTACAACG AAGCCGCCGG CAAGGGGTCG GACTGGTACG GCGAATCCGA ATGGGATCAG
CAGGAGTTCG ACGCCATGGT GGCCGCCCTC GACAAGGCGG GCGTGCAGGT GCACGTCCAC
GCCATCGGCG ACGGTGCCGT CCGCAACACG CTGAACGCCT TCGAGAACGC GATCAAGGAG
AACGGCGAGC GCGCCGACCG CCGCTACACC ATGACCCATG TGTGCGCCGT AGCCGACGAG
GACATCAAGA GGATCGCCGA CCTCGAGGTC ATCAGCGCGC TGCAGTTCCT GTGGATGTAC
CGCGACCCGC TGTGCGAGCT CGAGATCGCC TACATCGGAG AAGAGCGCGC GATGGCCATG
TACCCGGTCA AGAACATGCT GGAAGCCGGC TGCATCGTGA GCGGTGCCAG CGACGGCCCG
GTCACCCCGT TCGCGCCCCT GGAGGAGATC GAGGTCGCCG TCACGCGCAA CAGCCCCTAT
CCCGGCGAAG AGGACACCGA TATGCATCGC TGGCCCGAGC AGGCCATCAC GCCGTACCAG
GCCCTGGAAG CCTACACGAA GAACGTCGCG TTCGAGAACT TCATGGAGGA CCTCGTGGGA
ACCATCGAGG TCGGGAAGAA GGCCGACCTC GCGGTGCTCG ACCAGAACAT CCTGACCTGC
GACCCGAAGA AGATCTCCGA CAGCACCGTG CGCTACACGA TCTCCGACGG CCGCATCGTG
CACGAGGGCT AG
 
Protein sequence
MDTNQPSNTL SRRKFVKIGA TGAATLFILP ALSGCGSENG EAQTDEAEGG AGAQQKTATL 
AFRGGTIQTM TSENDVAEAL AVDGNEIVYV GDEAGLEAFV GSGTKVIDLE GGMVVPGFMD
GHIHAPGDWV TKLYDIYLGD ATTVDEYVKI ISDFVAAHPE REAYTGNPFM VNAFQLEDGS
NPGPNKKLLD EICPDKPILL LDVSHHSAWV NSKALEMANI TRDTPDPLGG IITRDEDGEP
TGYLIDGAAT EVSALVVSEH TDEEYEQAIA KYQEDASRFG LTGITNLSAV DARFFSELEK
AGELNLRMRI LPTIIPGTDP SEAVKTVKGL ARYDSEMIST GTAKMFSDGV TEGGSAVMLE
PYNEAAGKGS DWYGESEWDQ QEFDAMVAAL DKAGVQVHVH AIGDGAVRNT LNAFENAIKE
NGERADRRYT MTHVCAVADE DIKRIADLEV ISALQFLWMY RDPLCELEIA YIGEERAMAM
YPVKNMLEAG CIVSGASDGP VTPFAPLEEI EVAVTRNSPY PGEEDTDMHR WPEQAITPYQ
ALEAYTKNVA FENFMEDLVG TIEVGKKADL AVLDQNILTC DPKKISDSTV RYTISDGRIV
HEG