Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_1290 |
Symbol | |
ID | 8415585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | - |
Start bp | 1545968 |
End bp | 1547779 |
Gene Length | 1812 bp |
Protein Length | 603 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 645024256 |
Product | Amidohydrolase 3 |
Protein accession | YP_003181648 |
Protein GI | 257791042 |
COG category | [R] General function prediction only |
COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0346185 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATACGA ACCAACCATC GAACACGTTG TCCCGTAGGA AGTTCGTCAA AATCGGCGCG ACAGGAGCGG CCACGCTCTT CATCTTGCCG GCGCTTTCGG GCTGCGGAAG CGAAAACGGC GAAGCGCAAA CGGACGAGGC GGAGGGAGGC GCCGGCGCCC AGCAGAAAAC GGCCACCCTC GCGTTTCGCG GCGGCACGAT CCAAACCATG ACGTCCGAGA ACGACGTCGC CGAAGCCTTG GCCGTCGACG GCAACGAGAT CGTCTACGTC GGCGACGAAG CGGGGCTCGA AGCCTTCGTG GGAAGCGGCA CGAAGGTGAT CGACCTCGAG GGCGGCATGG TGGTACCCGG CTTCATGGAC GGTCACATCC ACGCCCCGGG AGACTGGGTC ACCAAGCTCT ACGACATATA CCTCGGCGAC GCGACCACCG TCGACGAGTA CGTGAAGATC ATCTCCGACT TCGTCGCGGC GCATCCCGAG CGCGAGGCGT ACACGGGCAA CCCGTTCATG GTGAACGCGT TCCAGCTGGA GGACGGCAGC AACCCCGGGC CGAACAAGAA GCTGCTCGAC GAGATCTGCC CCGACAAGCC CATCCTGCTT TTGGACGTCT CGCATCACTC CGCCTGGGTC AACAGCAAGG CGCTCGAGAT GGCGAACATC ACGCGCGACA CGCCCGACCC GCTCGGCGGC ATCATCACGA GGGACGAGGA CGGCGAGCCC ACCGGATATC TCATCGACGG CGCCGCCACC GAAGTGTCCG CCCTCGTCGT GTCCGAGCAC ACCGACGAAG AGTACGAGCA GGCCATCGCA AAGTACCAGG AGGACGCGTC GCGCTTCGGC CTGACCGGCA TCACGAACCT CTCCGCCGTG GACGCGCGCT TCTTCTCCGA ACTGGAAAAG GCCGGCGAGC TCAACCTGCG CATGAGGATC CTGCCCACCA TCATCCCCGG CACCGATCCG AGCGAAGCGG TCAAAACAGT CAAGGGACTG GCACGCTACG ACAGCGAGAT GATATCCACC GGCACCGCGA AGATGTTCTC CGACGGCGTC ACCGAAGGCG GCAGCGCCGT CATGCTGGAA CCGTACAACG AAGCCGCCGG CAAGGGGTCG GACTGGTACG GCGAATCCGA ATGGGATCAG CAGGAGTTCG ACGCCATGGT GGCCGCCCTC GACAAGGCGG GCGTGCAGGT GCACGTCCAC GCCATCGGCG ACGGTGCCGT CCGCAACACG CTGAACGCCT TCGAGAACGC GATCAAGGAG AACGGCGAGC GCGCCGACCG CCGCTACACC ATGACCCATG TGTGCGCCGT AGCCGACGAG GACATCAAGA GGATCGCCGA CCTCGAGGTC ATCAGCGCGC TGCAGTTCCT GTGGATGTAC CGCGACCCGC TGTGCGAGCT CGAGATCGCC TACATCGGAG AAGAGCGCGC GATGGCCATG TACCCGGTCA AGAACATGCT GGAAGCCGGC TGCATCGTGA GCGGTGCCAG CGACGGCCCG GTCACCCCGT TCGCGCCCCT GGAGGAGATC GAGGTCGCCG TCACGCGCAA CAGCCCCTAT CCCGGCGAAG AGGACACCGA TATGCATCGC TGGCCCGAGC AGGCCATCAC GCCGTACCAG GCCCTGGAAG CCTACACGAA GAACGTCGCG TTCGAGAACT TCATGGAGGA CCTCGTGGGA ACCATCGAGG TCGGGAAGAA GGCCGACCTC GCGGTGCTCG ACCAGAACAT CCTGACCTGC GACCCGAAGA AGATCTCCGA CAGCACCGTG CGCTACACGA TCTCCGACGG CCGCATCGTG CACGAGGGCT AG
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Protein sequence | MDTNQPSNTL SRRKFVKIGA TGAATLFILP ALSGCGSENG EAQTDEAEGG AGAQQKTATL AFRGGTIQTM TSENDVAEAL AVDGNEIVYV GDEAGLEAFV GSGTKVIDLE GGMVVPGFMD GHIHAPGDWV TKLYDIYLGD ATTVDEYVKI ISDFVAAHPE REAYTGNPFM VNAFQLEDGS NPGPNKKLLD EICPDKPILL LDVSHHSAWV NSKALEMANI TRDTPDPLGG IITRDEDGEP TGYLIDGAAT EVSALVVSEH TDEEYEQAIA KYQEDASRFG LTGITNLSAV DARFFSELEK AGELNLRMRI LPTIIPGTDP SEAVKTVKGL ARYDSEMIST GTAKMFSDGV TEGGSAVMLE PYNEAAGKGS DWYGESEWDQ QEFDAMVAAL DKAGVQVHVH AIGDGAVRNT LNAFENAIKE NGERADRRYT MTHVCAVADE DIKRIADLEV ISALQFLWMY RDPLCELEIA YIGEERAMAM YPVKNMLEAG CIVSGASDGP VTPFAPLEEI EVAVTRNSPY PGEEDTDMHR WPEQAITPYQ ALEAYTKNVA FENFMEDLVG TIEVGKKADL AVLDQNILTC DPKKISDSTV RYTISDGRIV HEG
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