Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_1266 |
Symbol | |
ID | 8415561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | + |
Start bp | 1520661 |
End bp | 1522823 |
Gene Length | 2163 bp |
Protein Length | 720 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 645024233 |
Product | ABC transporter related |
Protein accession | YP_003181625 |
Protein GI | 257791019 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000152073 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCATAA TTCGCTATCT GAAGAACTGC AAGGTGGCCG TGCTGCTCAT CGTGTGCCTG CTCGTCGTGC AGGCGTTCAC CGACCTGGCG CTGCCGCACT ACACGTCCGA TATCGTCGAT GTGGGCATCC AGCAGTCCGG CGTGGAGCAT GCGGCCACCG ACGAGATGAC GGCCAAGACC CATGACGAGA TCGCTATGAT GCTTCCGGTC GACGACGAGC AGACGTTCCG CGACGCTTAC ACCGAGACGG ACGACGGCAC GTACAAGCTC AACGACCAGG GCAAGAAGGA GCAGGAGGAG CTCGACCGCA TGGTGGCCCT GCCGCTGGTT GCCATCCATT ATTCCAGCCA GATCCCCGAC CTCGACCTCG GCCAGGTGAT GCAGGCCTAC GAGGCCGGCG CTATCGACAA GCAGAAGATC CTCGATATGC TGGACGAGGC CAAGCAGCAT ATGGGGGACA TGGGCGACTC CATCGTCGAC CAGCAGGCCA TCGCCGCCGC CAAGGCGGAG TACGAGTCGC TCGGCTACAA TCTGTCCGAC ATGCAGATGG GCTACCTCGT GCGCATCGGC CTTTTGATGT TGGGGCTTGC CGCCCTCGGC ATGGTCGCGG CCGTGCTCGT GGGCTTCATC GCCTCGCGCA CGGCCGCGAA GGTGGGCGCC ACGCTGCGCT CGAAGCTGTT CCGCCGCGTG GTGTCGTTCT CGGACGCCGA GGTGCAAAGC TTCTCGGCCG CCTCGCTCAT CACGCGCGGC ACGAACGACA TCCAGCTGGT GCAGATGGTC ACCGTCATGC TGCTGCGCAT GGTGCTGTAC GCGCCCATCC TCGCCATCGG CGGCATCATC ATGGTTTCGC GCACGAACCT CGCCATGAGC TGGATCATCA TCTTGGCCGT GGCGGTCATC TTCGTGCTCA TCATGGTGCT GATGCGCGTG GCGCTGCCCA AGTTCCAGAT CATGCAGACC CTCATCGACC GCGTGAACCT CGTGTCGCGC GAGATCCTCA CGGGCCTGCC CGTCATCCGC GCGTTCGACC GCCAGCCCTA CGAGGAGAAG CGCTTCGACG AGGCTTCCAC CAAGCTCATG AAGACGCAGC TGTTCACGAA CCGCGTCATG ACGTTCATGA TGCCCCTGAT GATGCTCATC ATGAACGGCG TGTCGGTGCT TATCGTATGG GTGGGCGGCA GCTACATCGA CAACGGCACC ATCCAGACGG GCGACCTCAT CGCGTTCATC ACCTACGCGA TGGTCATCAT CATGGGCTTC CTCATGATCG GCATGATCTC CATCATGCTG CCGCGCGCCG ACGTGGCGGC CCAGCGCGTG AACGAGGTGC TGGAAACAAA GCCCACCATC TGCGACCCGG CCGCCGACAA GGCCCGCGAC GCCGAGCTGC GCCGCTCGGA CGAGGGCGCG ACCATCGCCT TCAACGATGT GAGCTTCCGC TACGGCGATT CGAAGGAATG CGTGCTCGAG CACATCGACT TCACGGCCGA GTCCGGCAAG ACCACGGCGC TCATCGGCTC CACCGGATCG GGCAAGTCGA CGGTCATCAA GCTCATCGAG CGCTTCTACG ACGTGACGGA GGGCTCGGTC ACCATCGACG GCGTGGATGT GCGCGACGTC ACGCAGCAGG CGCTGCGCGA GCAGCTGGGC TACGTGCCGC AGAAGGCGTT TCTGTTCTCA GGCACCATCG AGTCGAACGT GGCCTACGCG GACGAGGGGA TGCCCGTCGA CCGCATCAGG GAGGCCGTCG ACATCGCCCA GGCGTCGGAG TTCGTCGCCT CGAAGGAGGA AGGCCTGGGC ACGCGCGTGT CGCAAGGCGG CTCGAACGTG TCGGGCGGCC AGCGCCAGCG CCTGGCCATC GCCCGCGCGC TGGCCACCGA GGCGCGCGCC TACCTGTTCG ACGACAGCTT CTCGGCGCTC GACTACAAGA CCGACGCCGC GCTGCGCCAG GAGCTGCACA CGCGCCTGGG CGGCAAGACC GTGGTCATCG TGGCGCAGCG CATCTCGACG GTGCTGCATG CCGACCGCAT CGTGGTGCTG GACGACGGCC GCATCGTGGG CCAGGGCACG CACGAGGAGC TGATGGAAAC CTGCGAGGAG TATCGGGAGA TCGCGATGTC CCAGCTGTCG GAAGCCGAGC TGAACGGAGG TGATGCGGCA TGA
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Protein sequence | MRIIRYLKNC KVAVLLIVCL LVVQAFTDLA LPHYTSDIVD VGIQQSGVEH AATDEMTAKT HDEIAMMLPV DDEQTFRDAY TETDDGTYKL NDQGKKEQEE LDRMVALPLV AIHYSSQIPD LDLGQVMQAY EAGAIDKQKI LDMLDEAKQH MGDMGDSIVD QQAIAAAKAE YESLGYNLSD MQMGYLVRIG LLMLGLAALG MVAAVLVGFI ASRTAAKVGA TLRSKLFRRV VSFSDAEVQS FSAASLITRG TNDIQLVQMV TVMLLRMVLY APILAIGGII MVSRTNLAMS WIIILAVAVI FVLIMVLMRV ALPKFQIMQT LIDRVNLVSR EILTGLPVIR AFDRQPYEEK RFDEASTKLM KTQLFTNRVM TFMMPLMMLI MNGVSVLIVW VGGSYIDNGT IQTGDLIAFI TYAMVIIMGF LMIGMISIML PRADVAAQRV NEVLETKPTI CDPAADKARD AELRRSDEGA TIAFNDVSFR YGDSKECVLE HIDFTAESGK TTALIGSTGS GKSTVIKLIE RFYDVTEGSV TIDGVDVRDV TQQALREQLG YVPQKAFLFS GTIESNVAYA DEGMPVDRIR EAVDIAQASE FVASKEEGLG TRVSQGGSNV SGGQRQRLAI ARALATEARA YLFDDSFSAL DYKTDAALRQ ELHTRLGGKT VVIVAQRIST VLHADRIVVL DDGRIVGQGT HEELMETCEE YREIAMSQLS EAELNGGDAA
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