Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_1244 |
Symbol | |
ID | 8415536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | + |
Start bp | 1492650 |
End bp | 1496147 |
Gene Length | 3498 bp |
Protein Length | 1165 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 645024208 |
Product | UvrD/REP helicase |
Protein accession | YP_003181603 |
Protein GI | 257790997 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0173598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTCT CAACCTGCAC CCCTGGTCAA CGCCAGAGCA TCGAGCACGT GCGCGGTCCC TTGCTCGTGT CGGCCGGCGC CGGCTCGGGC AAGACGTTCA CGCTCACGCA GCGCATCGCC TATGCGCTTC TGCCCGAGAG CGGCCCTGCG GCGTCCGGCG TCGACGAGGT GCTGGCCATC ACGTTCACCG AGAAGGCGGC CGCCGAGATC AAGGCGCGCG TCAAGCGCAC GCTGCGCGCC GAAGGGCTGG CCGAGGAAGC GCTGCGCGTG GACGGCGCCT GGATATCCAC CATCCACGGC ATGTGCGCGC GCATCCTGCG CGCCCACGCG CTCGACCTGG GGCTGGATCC TGCGTTCGGC ATCATGGGCG ATGCGGAGCG GGCCGAAGCC GTGGCCGACG CCATCGACGG CGCGCTGGGC GACGACAACG ATATCATCGC GCGCGGCTCG TACGCGGCGC TGTTCGACGA GTACCCCGCA CGCTCGACGA TGCCGCTCGC TCCGTCGGTG GCCTCCATGC TGCAGGCTCT GATGGACAAG GCGGCGGGGC TGCGCGGCGG CCTCGACGCG CTCGATTTCG GGCCGTCGCC CGCGCAGGCC TCGACGCTCG CGCGCGAGCT GCTGCTGGCC TACGAGGGCG TGCTGCCCGC GCTCGAGCGG GCGGGGAAGA GCGCGTCCGC CGAACGGGCG CGCGCGGCCG CGGCCGACGC GGTGGAGGCG CTCGGGGCGT TTTTGGCCGA CGCGTCCGCG GCGAGCGACG CGCGTGCGCT GGCAGCTGTG GTCGACGGCT GCGCCTACCT GCCGTGCACG TTCGGCGGCG CCGACGTGAA GGCCGAGGTC AAAGCGTATC AAGCTGTGCA CGCGCGCGTG GCTCAGAACG TCGCGCTCGC GCTGGCGCAC CCGCTGGCCT CCGAGCTCAT GGCGCTCGCG CGCGAGGTGA CCGCGCGCTT CGAGGGTGCG AAGCGCGCCG CGTGCAAGCT GGATAACGAC GACCTGCTCG TGCGCACGCT CGACGCGTTC GAACGCTGCC CGGACATCGC CGCGCGCTAC GAACGCCGCT TCAAACTGGT GATGGTGGAC GAGTTCCAGG ACACCAGCCA GCTGCAGATC GACATGATCG CGCGCCTGGC CGGGCCGCGG TGCGCGCACC TGTGCACGGT AGGCGATGCG CAGCAGTCCA TCTACCGCTT CCGCGGCGCC GACGTGAACG TGTACGAGGC TCATAAGAAG GCGATGCGCG CCGACGAAGT GGGCGCGCTC TACGTCGAGC TCACGAAGAA CTTCCGCAGC CACGGCGACG TGCTGTCGTT CGTCGACCGC GTGTTCGAGC AGTCGACGGT GTTCGGCGAG GCGTTCATGT CGCTGGAGCC GAACGAGCAG CGCCCCTCCT GCTATCGGGG CAGCGCGCCG CGCATCGACC TCGTGCTGTC GGTGCAGCCC GCGGGGCGCG GCACCGGCGT GCGCACGGCC GATGCGAAGC GCGCCGGCGC CGAGGCCATC GCCCGCCGGT TCGCCGCGCT GCGCGAGGAC GGCCACGCTC CCGGCGACAT GGTGGTGCTG CTGGGCAAGA TGAGCCGTGC GGGCATGTAT GCCGAGGCGC TGCGCGCCGA GGGCTTCGAG TGCGTGGTGA CGGGCGGGTC GCTGTTCGCG TCCGCGCCCG AAGTGCGCGT GGTCGCCCGC TTCGTGGAGG CGCTGGCGAA CCCGGCGAAC ACGGCTGCGC TGTTCGAAGT GCTGACCAGC GACATGATGC GTCTGTCGGC AGACGACCTC CTCGTGCTGA CCACCGAGGA GGATCCTGAG ACGGGATGCG TGCGGCGGCG CGATCTCGAC CGGGGCTTCG CGCGCCTCGC ATCGCGCGCC GACGGACTGC CGCCGCGGCT GGCGCACGCC GTGCGCCTGT TCGAGCGGGC GCGTGACGAG TCGCGCACGC GCCCGGTGGC GACCGTGGTG CGCGATGCCG TGGTGCGTTC GGGGTGGATG GCACGGCTCG AGGAGGAAGG CGCGGCGGGC ACGGCGCGAG CCGCGAACGT GCTGAAGGCC GTCCGGCTCG TCGATCGCCT CGAAACCGAG CGCCACCTGG GGCTGGCCTC CACGGCGCGC GCGCTGGCCG ACGAGCTGGC CGTAGGATTG AAGGAGGCGC CCGGCGCGTT GTCGGGAGCC GGCGGCGACG TGGTGAAGAT CATGACCATC CATGCTTCGA AGGGGCTGGA GTTCCCCGTC GTGGCGTTGG CCGACTTCGC CGACGCGCGC GCGGGAAGCG GCAAGCTTCT GGTGGAGACG TGCGGTGCCA TCGCGCGCGC CTCGTTGGCG CCCGCAGCGT CGTTGGAGGC GTTTCCCCAG CTGGCGAAGC GCTCGGGCGC GGCTGCGGCC GGCGACGGCG AGGATGATGC CGATCTGCTG GCCGCTCGCC GTCTCGTAGA AGGGGAGGAT GGGCCCGCGT GCGCTCTCGG CGCTTCGTCG TGCACGCAGG CGGCCTACCG CGCCCAGCTC GCGCGCCGTG CGGCCGACGA GGAGCTGGCC GAAGCGCGTC GCAAGCTCTA CGTGGGCCTC ACGCGTGCCA GCGAGGCGCT TGTGGTGGCG ATGGACGCGA AAGCTCCCTC GGCGGGCAAG CCTCCGGCGT ACGCCCCGCT CGTCGACGAT ATCCGCAGCG CGCTGTGCGG CGACGGCGAT TTTCCCGAGG GCGTTGCCGA GCTTCCCTAC GGCGGCACCG CGCCGGCCCG CTTCGAGCGC ATCCTCGTGC AGCCGCCGGA GCCGCGCGCC GAGGAGGGTG TCGAGCCTGC GCCCGAACCG CGGCTGTTCT TCGTGCCCGT CGTGGACGAC GCTTCGCGGT CGACGCTCTT CGCGGGAGGC TTGGCGCGCG ACGATGCGTT CTCGTACTCG TCGATCGCCC CGAACCCGCT TCCGGCTCCG GCGGACGAGG GCGTGCCTTT CGCCGCGGAC GCGGACAAGG CGACGGATCT GGGCAGCGCC TTCCATCGGG CGGCGCAGCT GGCCGTCGAG ACGGGAAGGG TTCCCGGCGC TGCGCGCCTC GGCGTGCTCT CCGAGGCGTA CGCTCTATCG ACGGGACAGC GCGCGCGGCT GGCCGATGCC TGCGAGCGCT GGTTCTCCAG CGCGACGTAC GCCGAAACGC TGCAGTGGGG GCTGCGGCGC GCCGAGGTGC CGTTCTTCGT GCCGATATCC GATGCGTTCG TGGAAGGGGA GATCGACCTT CTGTGCACCG ACGACGCGCA GCTTGCGGGC GCTCGTGCGC TCGTGGTGGA CTACAAGACC GGCGGTTCGG ACGGCGAGGC GCCGGAAGCG CTGCGCTCCA AGCACCTCCT GCAGGCGCAA TGCTACGCCT ATGCACTGCT GCGGCAGGGC TGCGTCGAGG TGGAGCTGCG CTTCGCGCGC GTCGAGCGCG AGGATTCGGC GGGGGGCATG CAAACCGTGA CCTACCGCTT CACTGCCGAA GATCTCGACG GGCTGGCCGT CCGCATCCTA AGCGCCCGAA GGGCGTAG
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Protein sequence | MNLSTCTPGQ RQSIEHVRGP LLVSAGAGSG KTFTLTQRIA YALLPESGPA ASGVDEVLAI TFTEKAAAEI KARVKRTLRA EGLAEEALRV DGAWISTIHG MCARILRAHA LDLGLDPAFG IMGDAERAEA VADAIDGALG DDNDIIARGS YAALFDEYPA RSTMPLAPSV ASMLQALMDK AAGLRGGLDA LDFGPSPAQA STLARELLLA YEGVLPALER AGKSASAERA RAAAADAVEA LGAFLADASA ASDARALAAV VDGCAYLPCT FGGADVKAEV KAYQAVHARV AQNVALALAH PLASELMALA REVTARFEGA KRAACKLDND DLLVRTLDAF ERCPDIAARY ERRFKLVMVD EFQDTSQLQI DMIARLAGPR CAHLCTVGDA QQSIYRFRGA DVNVYEAHKK AMRADEVGAL YVELTKNFRS HGDVLSFVDR VFEQSTVFGE AFMSLEPNEQ RPSCYRGSAP RIDLVLSVQP AGRGTGVRTA DAKRAGAEAI ARRFAALRED GHAPGDMVVL LGKMSRAGMY AEALRAEGFE CVVTGGSLFA SAPEVRVVAR FVEALANPAN TAALFEVLTS DMMRLSADDL LVLTTEEDPE TGCVRRRDLD RGFARLASRA DGLPPRLAHA VRLFERARDE SRTRPVATVV RDAVVRSGWM ARLEEEGAAG TARAANVLKA VRLVDRLETE RHLGLASTAR ALADELAVGL KEAPGALSGA GGDVVKIMTI HASKGLEFPV VALADFADAR AGSGKLLVET CGAIARASLA PAASLEAFPQ LAKRSGAAAA GDGEDDADLL AARRLVEGED GPACALGASS CTQAAYRAQL ARRAADEELA EARRKLYVGL TRASEALVVA MDAKAPSAGK PPAYAPLVDD IRSALCGDGD FPEGVAELPY GGTAPARFER ILVQPPEPRA EEGVEPAPEP RLFFVPVVDD ASRSTLFAGG LARDDAFSYS SIAPNPLPAP ADEGVPFAAD ADKATDLGSA FHRAAQLAVE TGRVPGAARL GVLSEAYALS TGQRARLADA CERWFSSATY AETLQWGLRR AEVPFFVPIS DAFVEGEIDL LCTDDAQLAG ARALVVDYKT GGSDGEAPEA LRSKHLLQAQ CYAYALLRQG CVEVELRFAR VEREDSAGGM QTVTYRFTAE DLDGLAVRIL SARRA
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