Gene Elen_1176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1176 
Symbol 
ID8415467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand+ 
Start bp1412010 
End bp1412717 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content68% 
IMG OID645024139 
ProductB3/4 domain protein 
Protein accessionYP_003181535 
Protein GI257790929 
COG category[S] Function unknown 
COG ID[COG3382] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.185017 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.273713 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCGT TTGCAATCGA ACCGGCGTTT TGGGAGCTGT TCCCCCAGGC GGAGATCGGC 
ATTGTGGTGG CCCGGGGCAT CGACAACGCG CACGAGTCCA GCGAGGACGT GAAGGCGGCG 
CTGGCCGAGG CGAACAAAGC GGCGCTCGCC CACGTGCCCG ATCCCACCAT CAGCAAGAAC 
CCCGCAGTAG CGGTGTGGCG CGAGGCGTTC CAGCAGTTCA AGACGAAGAA GGGCGCGCGC 
TCGTCCATCG AGGCGCTTCT GAAGCGCGCG AGCGGCGGCC GAGAAGTGGG CTCCATCAAC 
CCGCTCGTGG ACATTTACAA CACCGTGTCG CTGACGTACG CGCTGCCGTG CGGCGGCGAG 
GACATCGACA CGTTCGCCGG CGACCTGCGC CTCACGGTGA CGCAGGGCGG CGACGCGTTC 
CGCGCGCTGG GCGACGAGGC CGATTCCGAG ACGCTGCCGG GCGAGGTGTG CTACCTCGAC 
GACGCCGGCG CGGTGTGCCG TTGCTGGAAC TGGCGCGACG GCGTGCGCAC CATGCTCACC 
GAGAGCACGA CGAACGCGTT CCTCATCCTG GAATCCGTCG ACCCGGCGCG CCACGACGAC 
CTCGCAGCGG CCCTCGACGA TCTTGCAGCC CGCACCCAGG CGGCCCTCGG CGGCGAGATG 
GAATCCCGTA TCGTGACGAA GGACAGCCCG GCGATCGCCC TGTCGTAA
 
Protein sequence
MASFAIEPAF WELFPQAEIG IVVARGIDNA HESSEDVKAA LAEANKAALA HVPDPTISKN 
PAVAVWREAF QQFKTKKGAR SSIEALLKRA SGGREVGSIN PLVDIYNTVS LTYALPCGGE 
DIDTFAGDLR LTVTQGGDAF RALGDEADSE TLPGEVCYLD DAGAVCRCWN WRDGVRTMLT 
ESTTNAFLIL ESVDPARHDD LAAALDDLAA RTQAALGGEM ESRIVTKDSP AIALS