Gene Elen_1065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1065 
Symbol 
ID8415355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1287164 
End bp1287739 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content62% 
IMG OID645024028 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003181425 
Protein GI257790819 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0000345599 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGCGGAGCG AAACATCGCC TTCCGCTACA ATATTCTCCA AATTTCTCCG ACAAAACCCG 
CCGTTCGATC GTGTTGCAGT CAGAAAGGGA AAACCGCTGC AGAACAACGT CGACATAGCC
GCACTGTTCA ACCGCCACGC CGCGACGGTG TATAGGCTGT GCTACTCGTT TCTGGGCAGC
GCGGCCGACG CGGAGGACGC GACGCAGAGC GTGTTCATGA AGCTGATCGC CCGCCCGCGC
CGGTTCAACG ACGCGGAGCA CGAGAAGGCA TGGCTCATCG TATGCGCCCA GAACCATTGC
CGCGACGTGC TGAAGAGCGC GCACCGCACG CGGCAGGCCG TCCTTCCCGA AGACATCGCG
GACGAGAGGC GCGCGCAGCG GGACGAGACG CTGGATGCGG TGCTGGCCTT GCCGGAGAAG
TACAAGACCT GCGTGTACCT GTTCTATTAC GAGGGGTATC GCACGGCCGA GATAGCGGCC
TTGACCGGCG TGCCCGCCTC GACCGTGCGC AGCCACCTGA GCGAGGCGCG AGCGCTTTTG
AAGACGATGT TGGGAGGTGA GCGACATGGA CGATAA
 
Protein sequence
MRSETSPSAT IFSKFLRQNP PFDRVAVRKG KPLQNNVDIA ALFNRHAATV YRLCYSFLGS 
AADAEDATQS VFMKLIARPR RFNDAEHEKA WLIVCAQNHC RDVLKSAHRT RQAVLPEDIA
DERRAQRDET LDAVLALPEK YKTCVYLFYY EGYRTAEIAA LTGVPASTVR SHLSEARALL
KTMLGGERHG R