Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_1065 |
Symbol | |
ID | 8415355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | - |
Start bp | 1287164 |
End bp | 1287739 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 645024028 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003181425 |
Protein GI | 257790819 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0000345599 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGCGGAGCG AAACATCGCC TTCCGCTACA ATATTCTCCA AATTTCTCCG ACAAAACCCG CCGTTCGATC GTGTTGCAGT CAGAAAGGGA AAACCGCTGC AGAACAACGT CGACATAGCC GCACTGTTCA ACCGCCACGC CGCGACGGTG TATAGGCTGT GCTACTCGTT TCTGGGCAGC GCGGCCGACG CGGAGGACGC GACGCAGAGC GTGTTCATGA AGCTGATCGC CCGCCCGCGC CGGTTCAACG ACGCGGAGCA CGAGAAGGCA TGGCTCATCG TATGCGCCCA GAACCATTGC CGCGACGTGC TGAAGAGCGC GCACCGCACG CGGCAGGCCG TCCTTCCCGA AGACATCGCG GACGAGAGGC GCGCGCAGCG GGACGAGACG CTGGATGCGG TGCTGGCCTT GCCGGAGAAG TACAAGACCT GCGTGTACCT GTTCTATTAC GAGGGGTATC GCACGGCCGA GATAGCGGCC TTGACCGGCG TGCCCGCCTC GACCGTGCGC AGCCACCTGA GCGAGGCGCG AGCGCTTTTG AAGACGATGT TGGGAGGTGA GCGACATGGA CGATAA
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Protein sequence | MRSETSPSAT IFSKFLRQNP PFDRVAVRKG KPLQNNVDIA ALFNRHAATV YRLCYSFLGS AADAEDATQS VFMKLIARPR RFNDAEHEKA WLIVCAQNHC RDVLKSAHRT RQAVLPEDIA DERRAQRDET LDAVLALPEK YKTCVYLFYY EGYRTAEIAA LTGVPASTVR SHLSEARALL KTMLGGERHG R
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